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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170920761
MDTG01002410
289357
Actinomycetota
CTC
Glu
>WENV170921133
MDTG01008892
198609
Actinomycetota
TGG
Pro
>WENV170921301
MDTG01011680
198609
Actinomycetota
TGG
Pro
>WENV170921712
MDTG01018962
399484
Actinomycetota
GCC
Gly
>WENV170921898
MDTG01022091
189180
Actinomycetota
GGG
Pro
>WENV170922881
MDTG01039477
480761
Actinomycetota
GCA
Cys
>WENV170923083
MDTG01042765
404610
Actinomycetota
CCT
Arg
>WENV170923154
MDTG01044216
177601
Actinomycetota
CAT
Met
>WENV170924327
MDTG01064210
305465
Actinomycetota
TTT
Lys
>WENV170924328
MDTG01064210
56310
Actinomycetota
GGA
Ser
>WENV170925157
MDTG01079046
289357
Actinomycetota
CTC
Glu
>WENV170925886
MDTG01091939
285571
Actinomycetota
GGC
Ala
>WENV170926014
MDTG01093532
302020
Actinomycetota
CCG
Arg
>WENV170927251
MDTG01114142
20383
Actinomycetota
CGA
Ser
>WENV170930162
MDTG01162702
57196
Actinomycetota
GAG
Leu
>WENV170930735
MDTG01172593
283002
Actinomycetota
ACG
Arg
>WENV170931394
MDTG01183860
57196
Actinomycetota
GAG
Leu
>WENV170933207
MDTG01216931
180471
Actinomycetota
CAT
Met
>WENV170933937
MDTG01229381
290589
Actinomycetota
CCG
Arg
>WENV170934556
MDTG01240758
57288
Actinomycetota
TGA
Ser
>WENV170934704
MDTG01243231
281113
Actinomycetota
GGT
Thr
>WENV170934774
MDTG01244423
286483
Actinomycetota
>WENV170935303
MDTG01254336
177601
Actinomycetota
CAT
Met
>WENV170935543
MDTG01258941
404610
Actinomycetota
CCT
Arg
>WENV170935835
MDTG01264464
290589
Actinomycetota
CCG
Arg
>WENV170937626
MDTG01294821
57196
Actinomycetota
GAG
Leu
>WENV170937834
MDTG01298834
414769
Actinomycetota
CCT
Arg
>WENV170938582
MDTG01311335
404610
Actinomycetota
CCT
Arg
>WENV170939127
MDTG01320556
281633
Actinomycetota
CCA
Trp
>WENV170939839
MDTG01332872
301953
Actinomycetota
TGT
Thr
>WENV170940759
MDTG01348654
286398
Actinomycetota
GTT
Asn
>WENV170941241
MDTG01357036
289355
Actinomycetota
CAC
Val
>WENV170941940
MDTG01369241
286628
Actinomycetota
GTG
His
>WENV170942393
MDTG01377345
302019
Actinomycetota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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