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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180130248
OATG01000018
176638
Actinomycetota
GGG
Pro
>WENV180130242
OATG01000018
480319
Actinomycetota
TTG
Gln
>WENV180130288
OATG01000038
280498
Actinomycetota
GTT
Asn
>WENV180130289
OATG01000038
280498
Actinomycetota
GTT
Asn
>WENV180130291
OATG01000038
280498
Actinomycetota
GTT
Asn
>WENV180130290
OATG01000038
280523
Actinomycetota
GGC
Ala
>WENV180130309
OATG01000053
280450
Actinomycetota
TTT
Lys
>WENV180130337
OATG01000074
317680
Actinomycetota
CCG
Arg
>WENV180130351
OATG01000084
175837
Actinomycetota
ACG
Arg
>WENV180130352
OATG01000084
175837
Actinomycetota
ACG
Arg
>WENV180130354
OATG01000088
179231
Actinomycetota
TAC
Val
>WENV180130355
OATG01000088
280499
Actinomycetota
CCT
Arg
>WENV180130360
OATG01000089
203883
Actinomycetota
TCT
Arg
>WENV180130377
OATG01000118
140768
Actinomycetota
TAG
Leu
>WENV180130374
OATG01000118
280489
Actinomycetota
CTC
Glu
>WENV180130375
OATG01000118
398853
Actinomycetota
CTG
Gln
>WENV180130376
OATG01000118
280470
Actinomycetota
CGT
Thr
>WENV180130428
OATG01000177
56166
Actinomycetota
TGA
Ser
>WENV180130429
OATG01000177
46642
Actinomycetota
CGA
Ser
>WENV180130472
OATG01000225
147806
Actinomycetota
TAA
Leu
>WENV180130521
OATG01000280
480329
Actinomycetota
CCC
Gly
>WENV180130522
OATG01000280
104211
Actinomycetota
CAG
Leu
>WENV180130555
OATG01000347
176555
Actinomycetota
CAT
Met
>WENV180130622
OATG01000469
176499
Actinomycetota
CAT
Met
>WENV180130621
OATG01000469
117903
Actinomycetota
GTA
Tyr
>WENV180130763
OATG01000895
175882
Actinomycetota
TGG
Pro
>WENV180130762
OATG01000895
176642
Actinomycetota
CAA
Leu
>WENV180131110
OATG01002816
280524
Actinomycetota
TGC
Ala
>WENV180131111
OATG01002816
280523
Actinomycetota
GGC
Ala
>WENV180131365
OATG01012402
176077
Actinomycetota
CAT
Met
>WENV180131367
OATG01012731
60767
Actinomycetota
TGA
Ser
>WENV180131399
OATG01017667
176075
Actinomycetota
TCT
Arg
>WENV180131417
OATG01020795
227544
Actinomycetota
TAC
Val
>WENV180131437
OATG01027911
29393
Actinomycetota
GCT
Ser
>WENV180131454
OATG01032115
280496
Actinomycetota
CGT
Thr
>WENV180131462
OATG01035168
481233
Actinomycetota
CCC
Gly
>WENV180131470
OATG01039125
280703
Actinomycetota
CCT
Arg
>WENV180131473
OATG01040482
147829
Actinomycetota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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