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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
106 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180132962
OATI01001837
235146
Actinomycetota
CGT
Thr
>WENV180132921
OATI01001544
119475
Actinomycetota
TAA
Leu
>WENV180133027
OATI01002741
235347
Actinomycetota
GGC
Ala
>WENV180133028
OATI01002741
235347
Actinomycetota
GGC
Ala
>WENV180132629
OATI01000358
235153
Actinomycetota
CCT
Arg
>WENV180132624
OATI01000348
3239
Actinomycetota
GCT
Ser
>WENV180132781
OATI01000746
144589
Actinomycetota
ACG
Arg
>WENV180132782
OATI01000746
144589
Actinomycetota
ACG
Arg
>WENV180132764
OATI01000696
37070
Actinomycetota
CGA
Ser
>WENV180133043
OATI01002997
201717
Actinomycetota
CTT
Lys
>WENV180132819
OATI01000850
201717
Actinomycetota
CTT
Lys
>WENV180132727
OATI01000588
144600
Actinomycetota
TGG
Pro
>WENV180132945
OATI01001705
235092
Actinomycetota
CCG
Arg
>WENV180133109
OATI01005833
235194
Actinomycetota
GTG
His
>WENV180133100
OATI01004721
235194
Actinomycetota
GTG
His
>WENV180132960
OATI01001837
273786
Actinomycetota
CGT
Thr
>WENV180133047
OATI01003027
158720
Actinomycetota
ACG
Arg
>WENV180132643
OATI01000387
158720
Actinomycetota
ACG
Arg
>WENV180132642
OATI01000387
158720
Actinomycetota
ACG
Arg
>WENV180132926
OATI01001547
245301
Actinomycetota
GCC
Gly
>WENV180132925
OATI01001547
245301
Actinomycetota
GCC
Gly
>WENV180132923
OATI01001547
245301
Actinomycetota
GCC
Gly
>WENV180133074
OATI01003725
411601
Actinomycetota
CCC
Gly
>WENV180132799
OATI01000793
144826
Actinomycetota
GGG
Pro
>WENV180132875
OATI01001197
23370
Actinomycetota
GCT
Ser
>WENV180132688
OATI01000478
23370
Actinomycetota
GCT
Ser
>WENV180132946
OATI01001723
174149
Actinomycetota
GAT
Ile
>WENV180132757
OATI01000674
174149
Actinomycetota
GAT
Ile
>WENV180133041
OATI01002981
338239
Actinomycetota
TTC
Glu
>WENV180133014
OATI01002422
338239
Actinomycetota
TTC
Glu
>WENV180132756
OATI01000672
16219
Actinomycetota
GCT
Ser
>WENV180132947
OATI01001723
235174
Actinomycetota
TGC
Ala
>WENV180132877
OATI01001221
235174
Actinomycetota
TGC
Ala
>WENV180132758
OATI01000674
235174
Actinomycetota
TGC
Ala
>WENV180132725
OATI01000585
235101
Actinomycetota
TTT
Lys
>WENV180132614
OATI01000337
235101
Actinomycetota
TTT
Lys
>WENV180133227
OATI01017526
356045
Actinomycetota
GAC
Val
>WENV180133003
OATI01002319
356045
Actinomycetota
GAC
Val
>WENV180132998
OATI01002301
356045
Actinomycetota
GAC
Val
>WENV180132917
OATI01001504
356045
Actinomycetota
GAC
Val
>WENV180132814
OATI01000827
144625
Actinomycetota
GTC
Asp
>WENV180132995
OATI01002261
153948
Actinomycetota
GGG
Pro
>WENV180132964
OATI01001886
145345
Actinomycetota
TAC
Val
>WENV180132655
OATI01000414
145345
Actinomycetota
TAC
Val
>WENV180133228
OATI01017526
235199
Actinomycetota
CAC
Val
>WENV180133004
OATI01002319
235199
Actinomycetota
CAC
Val
>WENV180132999
OATI01002301
235199
Actinomycetota
CAC
Val
>WENV180132918
OATI01001504
235199
Actinomycetota
CAC
Val
>WENV180132910
OATI01001429
44862
Actinomycetota
CGA
Ser
>WENV180132865
OATI01001127
367535
Actinomycetota
CTG
Gln
>WENV180132868
OATI01001147
413665
Actinomycetota
TTG
Gln
>WENV180132892
OATI01001265
45154
Actinomycetota
TGA
Ser
>WENV180132979
OATI01002057
254857
Actinomycetota
CCG
Arg
>WENV180132644
OATI01000394
16223
Actinomycetota
GAG
Leu
>WENV180132651
OATI01000408
144593
Actinomycetota
TAT
Ile
>WENV180132687
OATI01000478
144700
Actinomycetota
CAT
Met
>WENV180132771
OATI01000715
144636
Actinomycetota
GAT
Ile
>WENV180132769
OATI01000715
144636
Actinomycetota
GAT
Ile
>WENV180132864
OATI01001127
295695
Actinomycetota
CTC
Glu
>WENV180132660
OATI01000420
295695
Actinomycetota
CTC
Glu
>WENV180132676
OATI01000455
98279
Actinomycetota
GTA
Tyr
>WENV180132661
OATI01000420
338148
Actinomycetota
CTG
Gln
>WENV180133031
OATI01002818
235148
Actinomycetota
GTT
Asn
>WENV180132884
OATI01001254
235148
Actinomycetota
GTT
Asn
>WENV180132839
OATI01000995
235148
Actinomycetota
GTT
Asn
>WENV180132863
OATI01001127
53078
Actinomycetota
GGA
Ser
>WENV180132748
OATI01000632
53078
Actinomycetota
GGA
Ser
>WENV180132625
OATI01000348
338238
Actinomycetota
CCA
Trp
>WENV180133104
OATI01004938
176456
Actinomycetota
TCT
Arg
>WENV180132849
OATI01001040
144825
Actinomycetota
CAT
Met
>WENV180132767
OATI01000713
144825
Actinomycetota
CAT
Met
>WENV180133030
OATI01002803
119508
Actinomycetota
TAA
Leu
>WENV180132763
OATI01000693
338139
Actinomycetota
GTT
Asn
>WENV180132762
OATI01000693
338139
Actinomycetota
GTT
Asn
>WENV180132848
OATI01001033
235348
Actinomycetota
CCT
Arg
>WENV180132812
OATI01000823
235348
Actinomycetota
CCT
Arg
>WENV180132659
OATI01000419
411554
Actinomycetota
CCC
Gly
>WENV180132961
OATI01001837
113601
Actinomycetota
TAG
Leu
>WENV180132794
OATI01000785
113601
Actinomycetota
TAG
Leu
>WENV180132929
OATI01001552
144595
Actinomycetota
CAA
Leu
>WENV180132846
OATI01001014
144595
Actinomycetota
CAA
Leu
>WENV180132726
OATI01000588
144595
Actinomycetota
CAA
Leu
>WENV180132804
OATI01000800
145343
Actinomycetota
GGG
Pro
>WENV180133024
OATI01002663
431657
Actinomycetota
CCC
Gly
>WENV180132750
OATI01000645
235149
Actinomycetota
CCT
Arg
>WENV180132820
OATI01000857
414234
Actinomycetota
CTG
Gln
>WENV180132793
OATI01000785
235121
Actinomycetota
CGT
Thr
>WENV180132847
OATI01001014
144635
Actinomycetota
TGG
Pro
>WENV180132994
OATI01002249
61501
Actinomycetota
CAG
Leu
>WENV180133032
OATI01002828
45852
Actinomycetota
CGA
Ser
>WENV180132932
OATI01001591
80622
Actinomycetota
CAG
Leu
>WENV180132658
OATI01000419
80622
Actinomycetota
CAG
Leu
>WENV180133055
OATI01003134
44851
Actinomycetota
TGA
Ser
>WENV180132990
OATI01002221
16222
Actinomycetota
GAG
Leu
>WENV180132724
OATI01000577
16222
Actinomycetota
GAG
Leu
>WENV180132652
OATI01000409
158513
Actinomycetota
TGG
Pro
>WENV180132924
OATI01001547
412834
Actinomycetota
GCA
Cys
>WENV180132878
OATI01001221
235173
Actinomycetota
GGC
Ala
>WENV180133016
OATI01002433
243162
Actinomycetota
GTT
Asn
>WENV180133008
OATI01002378
243162
Actinomycetota
GTT
Asn
>WENV180132985
OATI01002137
243162
Actinomycetota
GTT
Asn
>WENV180132973
OATI01001993
144660
Actinomycetota
TAC
Val
>WENV180132897
OATI01001291
278447
Actinomycetota
GTG
His
>WENV180132686
OATI01000478
95593
Actinomycetota
>WENV180132948
OATI01001734
144823
Actinomycetota
TCT
Arg
>WENV180132934
OATI01001614
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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