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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180160729
OAVD01000013
175837
Actinomycetota
ACG
Arg
>WENV180160730
OAVD01000013
175837
Actinomycetota
ACG
Arg
>WENV180160731
OAVD01000014
280450
Actinomycetota
TTT
Lys
>WENV180160736
OAVD01000017
179231
Actinomycetota
TAC
Val
>WENV180160737
OAVD01000017
280499
Actinomycetota
CCT
Arg
>WENV180160748
OAVD01000022
480319
Actinomycetota
TTG
Gln
>WENV180160754
OAVD01000022
176638
Actinomycetota
GGG
Pro
>WENV180160767
OAVD01000030
317680
Actinomycetota
CCG
Arg
>WENV180160774
OAVD01000035
280498
Actinomycetota
GTT
Asn
>WENV180160775
OAVD01000035
280498
Actinomycetota
GTT
Asn
>WENV180160783
OAVD01000044
398853
Actinomycetota
CTG
Gln
>WENV180160784
OAVD01000044
280470
Actinomycetota
CGT
Thr
>WENV180160785
OAVD01000044
140768
Actinomycetota
TAG
Leu
>WENV180160803
OAVD01000060
291585
Actinomycetota
GCC
Gly
>WENV180160804
OAVD01000060
481719
Actinomycetota
GCA
Cys
>WENV180160805
OAVD01000060
291585
Actinomycetota
GCC
Gly
>WENV180160806
OAVD01000060
291585
Actinomycetota
GCC
Gly
>WENV180160841
OAVD01000096
323758
Actinomycetota
CGT
Thr
>WENV180160842
OAVD01000096
140768
Actinomycetota
TAG
Leu
>WENV180160843
OAVD01000096
280496
Actinomycetota
CGT
Thr
>WENV180160862
OAVD01000138
147806
Actinomycetota
TAA
Leu
>WENV180160868
OAVD01000151
176077
Actinomycetota
CAT
Met
>WENV180160869
OAVD01000151
280703
Actinomycetota
CCT
Arg
>WENV180160875
OAVD01000160
176555
Actinomycetota
CAT
Met
>WENV180160885
OAVD01000177
179238
Actinomycetota
GAT
Ile
>WENV180160886
OAVD01000177
280524
Actinomycetota
TGC
Ala
>WENV180160887
OAVD01000177
191955
Actinomycetota
TGT
Thr
>WENV180160890
OAVD01000182
175907
Actinomycetota
TAC
Val
>WENV180160898
OAVD01000194
20208
Actinomycetota
GAG
Leu
>WENV180160901
OAVD01000195
117903
Actinomycetota
GTA
Tyr
>WENV180160902
OAVD01000195
176499
Actinomycetota
CAT
Met
>WENV180160913
OAVD01000209
176642
Actinomycetota
CAA
Leu
>WENV180160914
OAVD01000209
175882
Actinomycetota
TGG
Pro
>WENV180160916
OAVD01000210
280524
Actinomycetota
TGC
Ala
>WENV180160917
OAVD01000210
280523
Actinomycetota
GGC
Ala
>WENV180160919
OAVD01000211
289788
Actinomycetota
CTC
Glu
>WENV180160920
OAVD01000211
430848
Actinomycetota
CTG
Gln
>WENV180160926
OAVD01000230
117777
Actinomycetota
>WENV180160927
OAVD01000230
175949
Actinomycetota
CAT
Met
>WENV180160928
OAVD01000230
29393
Actinomycetota
GCT
Ser
>WENV180160930
OAVD01000233
56166
Actinomycetota
TGA
Ser
>WENV180160951
OAVD01000254
203883
Actinomycetota
TCT
Arg
>WENV180160954
OAVD01000258
434162
Actinomycetota
GAC
Val
>WENV180160955
OAVD01000258
280549
Actinomycetota
CAC
Val
>WENV180160960
OAVD01000266
175843
Actinomycetota
CAA
Leu
>WENV180160961
OAVD01000266
175848
Actinomycetota
TGG
Pro
>WENV180160974
OAVD01000288
398948
Actinomycetota
TTC
Glu
>WENV180160990
OAVD01000324
46642
Actinomycetota
CGA
Ser
>WENV180160994
OAVD01000343
56075
Actinomycetota
TGA
Ser
>WENV180160995
OAVD01000347
280523
Actinomycetota
GGC
Ala
>WENV180160996
OAVD01000347
280498
Actinomycetota
GTT
Asn
>WENV180161015
OAVD01000381
150272
Actinomycetota
TAA
Leu
>WENV180161016
OAVD01000382
222475
Actinomycetota
CTT
Lys
>WENV180161017
OAVD01000392
480329
Actinomycetota
CCC
Gly
>WENV180161033
OAVD01000425
59689
Actinomycetota
GGA
Ser
>WENV180161045
OAVD01000450
280498
Actinomycetota
GTT
Asn
>WENV180161054
OAVD01000476
176075
Actinomycetota
TCT
Arg
>WENV180161071
OAVD01000525
280503
Actinomycetota
CCT
Arg
>WENV180161072
OAVD01000527
398843
Actinomycetota
GTT
Asn
>WENV180161073
OAVD01000527
398843
Actinomycetota
GTT
Asn
>WENV180161079
OAVD01000547
434162
Actinomycetota
GAC
Val
>WENV180161080
OAVD01000547
280549
Actinomycetota
CAC
Val
>WENV180161094
OAVD01000604
280544
Actinomycetota
GTG
His
>WENV180161112
OAVD01000671
176078
Actinomycetota
GGG
Pro
>WENV180161119
OAVD01000702
482604
Actinomycetota
TTG
Gln
>WENV180161120
OAVD01000702
280702
Actinomycetota
GGC
Ala
>WENV180161121
OAVD01000702
280702
Actinomycetota
GGC
Ala
>WENV180161124
OAVD01000740
483206
Actinomycetota
CTG
Gln
>WENV180161149
OAVD01000806
56083
Actinomycetota
CGA
Ser
>WENV180161172
OAVD01000898
175883
Actinomycetota
GAT
Ile
>WENV180161174
OAVD01000898
175883
Actinomycetota
GAT
Ile
>WENV180161196
OAVD01000969
317680
Actinomycetota
CCG
Arg
>WENV180161216
OAVD01001262
99865
Actinomycetota
CAG
Leu
>WENV180161222
OAVD01001313
280498
Actinomycetota
GTT
Asn
>WENV180161223
OAVD01001313
295964
Actinomycetota
GTT
Asn
>WENV180161224
OAVD01001321
175926
Actinomycetota
CAT
Met
>WENV180161235
OAVD01001402
280536
Actinomycetota
CTT
Lys
>WENV180161236
OAVD01001402
280536
Actinomycetota
CTT
Lys
>WENV180161245
OAVD01001489
175837
Actinomycetota
ACG
Arg
>WENV180161246
OAVD01001489
175837
Actinomycetota
ACG
Arg
>WENV180161284
OAVD01002480
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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