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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180164954
OAVJ01057519
280549
Actinomycetota
CAC
Val
>WENV180164973
OAVJ01072589
317680
Actinomycetota
CCG
Arg
>WENV180164836
OAVJ01020217
56083
Actinomycetota
CGA
Ser
>WENV180164802
OAVJ01014898
280496
Actinomycetota
CGT
Thr
>WENV180164988
OAVJ01081159
280470
Actinomycetota
CGT
Thr
>WENV180164922
OAVJ01047813
289788
Actinomycetota
CTC
Glu
>WENV180164923
OAVJ01047813
398853
Actinomycetota
CTG
Gln
>WENV180164937
OAVJ01052145
59689
Actinomycetota
GGA
Ser
>WENV180164982
OAVJ01079110
280702
Actinomycetota
GGC
Ala
>WENV180164935
OAVJ01051716
280498
Actinomycetota
GTT
Asn
>WENV180164944
OAVJ01052577
140768
Actinomycetota
TAG
Leu
>WENV180164948
OAVJ01053418
191955
Actinomycetota
TGT
Thr
>WENV180164967
OAVJ01068664
482604
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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