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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
117 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180165573
OAVK01007664
95593
Actinomycetota
>WENV180165332
OAVK01000668
95593
Actinomycetota
>WENV180165212
OAVK01000176
158720
Actinomycetota
ACG
Arg
>WENV180165211
OAVK01000176
158720
Actinomycetota
ACG
Arg
>WENV180165202
OAVK01000160
158720
Actinomycetota
ACG
Arg
>WENV180165201
OAVK01000160
158720
Actinomycetota
ACG
Arg
>WENV180165064
OAVK01000030
158720
Actinomycetota
ACG
Arg
>WENV180165065
OAVK01000030
147146
Actinomycetota
ACG
Arg
>WENV180165569
OAVK01007249
289966
Actinomycetota
ACG
Arg
>WENV180165208
OAVK01000172
144595
Actinomycetota
CAA
Leu
>WENV180165204
OAVK01000161
144595
Actinomycetota
CAA
Leu
>WENV180165137
OAVK01000099
144595
Actinomycetota
CAA
Leu
>WENV180165119
OAVK01000072
235199
Actinomycetota
CAC
Val
>WENV180165093
OAVK01000052
235199
Actinomycetota
CAC
Val
>WENV180165158
OAVK01000117
267574
Actinomycetota
CAC
Val
>WENV180165020
OAVK01000008
267574
Actinomycetota
CAC
Val
>WENV180165482
OAVK01002327
80899
Actinomycetota
CAG
Leu
>WENV180165292
OAVK01000435
80622
Actinomycetota
CAG
Leu
>WENV180165260
OAVK01000309
80622
Actinomycetota
CAG
Leu
>WENV180165574
OAVK01007664
144700
Actinomycetota
CAT
Met
>WENV180165290
OAVK01000407
144825
Actinomycetota
CAT
Met
>WENV180165155
OAVK01000115
144825
Actinomycetota
CAT
Met
>WENV180165460
OAVK01002029
338489
Actinomycetota
CAT
Met
>WENV180165432
OAVK01001592
163948
Actinomycetota
CAT
Met
>WENV180165358
OAVK01000829
412399
Actinomycetota
CCC
Gly
>WENV180165293
OAVK01000435
412399
Actinomycetota
CCC
Gly
>WENV180165257
OAVK01000305
411554
Actinomycetota
CCC
Gly
>WENV180165090
OAVK01000052
254857
Actinomycetota
CCG
Arg
>WENV180165101
OAVK01000056
254857
Actinomycetota
CCG
Arg
>WENV180165270
OAVK01000333
237794
Actinomycetota
CCG
Arg
>WENV180165087
OAVK01000049
237792
Actinomycetota
CCT
Arg
>WENV180165225
OAVK01000216
235348
Actinomycetota
CCT
Arg
>WENV180165197
OAVK01000153
235348
Actinomycetota
CCT
Arg
>WENV180165391
OAVK01001087
44862
Actinomycetota
CGA
Ser
>WENV180165279
OAVK01000363
45147
Actinomycetota
CGA
Ser
>WENV180165345
OAVK01000708
45852
Actinomycetota
CGA
Ser
>WENV180165539
OAVK01004507
45149
Actinomycetota
CGA
Ser
>WENV180165299
OAVK01000451
235146
Actinomycetota
CGT
Thr
>WENV180165297
OAVK01000451
273786
Actinomycetota
CGT
Thr
>WENV180165134
OAVK01000093
273786
Actinomycetota
CGT
Thr
>WENV180165149
OAVK01000108
235121
Actinomycetota
CGT
Thr
>WENV180165380
OAVK01001020
237803
Actinomycetota
CGT
Thr
>WENV180165244
OAVK01000265
243671
Actinomycetota
CTC
Glu
>WENV180165184
OAVK01000142
243671
Actinomycetota
CTC
Glu
>WENV180165500
OAVK01002802
237812
Actinomycetota
CTC
Glu
>WENV180165499
OAVK01002802
339640
Actinomycetota
CTG
Gln
>WENV180165245
OAVK01000265
338148
Actinomycetota
CTG
Gln
>WENV180165548
OAVK01005326
345416
Actinomycetota
CTG
Gln
>WENV180165185
OAVK01000142
356597
Actinomycetota
CTG
Gln
>WENV180165100
OAVK01000056
166493
Actinomycetota
CTT
Lys
>WENV180165142
OAVK01000105
166493
Actinomycetota
CTT
Lys
>WENV180165160
OAVK01000117
166493
Actinomycetota
CTT
Lys
>WENV180165383
OAVK01001038
237815
Actinomycetota
CTT
Lys
>WENV180165476
OAVK01002181
147156
Actinomycetota
GAA
Phe
>WENV180165118
OAVK01000072
356045
Actinomycetota
GAC
Val
>WENV180165092
OAVK01000052
356045
Actinomycetota
GAC
Val
>WENV180165430
OAVK01001588
339641
Actinomycetota
GAC
Val
>WENV180165214
OAVK01000184
16400
Actinomycetota
GAG
Leu
>WENV180165395
OAVK01001117
37209
Actinomycetota
GAG
Leu
>WENV180165326
OAVK01000586
16222
Actinomycetota
GAG
Leu
>WENV180165130
OAVK01000081
16222
Actinomycetota
GAG
Leu
>WENV180165178
OAVK01000131
174149
Actinomycetota
GAT
Ile
>WENV180165115
OAVK01000071
174149
Actinomycetota
GAT
Ile
>WENV180165304
OAVK01000490
23370
Actinomycetota
GCT
Ser
>WENV180165217
OAVK01000197
23370
Actinomycetota
GCT
Ser
>WENV180165349
OAVK01000754
16219
Actinomycetota
GCT
Ser
>WENV180165243
OAVK01000265
47164
Actinomycetota
GGA
Ser
>WENV180165239
OAVK01000249
47164
Actinomycetota
GGA
Ser
>WENV180165209
OAVK01000173
47164
Actinomycetota
GGA
Ser
>WENV180165341
OAVK01000691
235347
Actinomycetota
GGC
Ala
>WENV180165342
OAVK01000691
235347
Actinomycetota
GGC
Ala
>WENV180165231
OAVK01000238
235173
Actinomycetota
GGC
Ala
>WENV180165159
OAVK01000117
235173
Actinomycetota
GGC
Ala
>WENV180165327
OAVK01000622
144826
Actinomycetota
GGG
Pro
>WENV180165022
OAVK01000008
144826
Actinomycetota
GGG
Pro
>WENV180165459
OAVK01002029
237816
Actinomycetota
GGT
Thr
>WENV180165475
OAVK01002181
147155
Actinomycetota
GTC
Asp
>WENV180165578
OAVK01008196
235194
Actinomycetota
GTG
His
>WENV180165387
OAVK01001045
235194
Actinomycetota
GTG
His
>WENV180165220
OAVK01000202
235148
Actinomycetota
GTT
Asn
>WENV180165322
OAVK01000560
243162
Actinomycetota
GTT
Asn
>WENV180165254
OAVK01000292
243162
Actinomycetota
GTT
Asn
>WENV180165253
OAVK01000292
243162
Actinomycetota
GTT
Asn
>WENV180165219
OAVK01000202
243162
Actinomycetota
GTT
Asn
>WENV180165023
OAVK01000008
243162
Actinomycetota
GTT
Asn
>WENV180165203
OAVK01000161
121510
Actinomycetota
TAA
Leu
>WENV180165026
OAVK01000011
113702
Actinomycetota
TAA
Leu
>WENV180165207
OAVK01000172
119508
Actinomycetota
TAA
Leu
>WENV180165457
OAVK01001989
147157
Actinomycetota
TAC
Val
>WENV180165113
OAVK01000068
145345
Actinomycetota
TAC
Val
>WENV180165084
OAVK01000042
145345
Actinomycetota
TAC
Val
>WENV180165287
OAVK01000398
144660
Actinomycetota
TAC
Val
>WENV180165150
OAVK01000108
113703
Actinomycetota
TAG
Leu
>WENV180165298
OAVK01000451
113601
Actinomycetota
TAG
Leu
>WENV180165135
OAVK01000093
113601
Actinomycetota
TAG
Leu
>WENV180165393
OAVK01001105
415620
Actinomycetota
TCC
Gly
>WENV180165227
OAVK01000225
144823
Actinomycetota
TCT
Arg
>WENV180165182
OAVK01000139
144823
Actinomycetota
TCT
Arg
>WENV180165180
OAVK01000137
144823
Actinomycetota
TCT
Arg
>WENV180165443
OAVK01001751
80900
Actinomycetota
TGA
Ser
>WENV180165280
OAVK01000365
45154
Actinomycetota
TGA
Ser
>WENV180165151
OAVK01000113
51286
Actinomycetota
TGA
Ser
>WENV180165179
OAVK01000131
235174
Actinomycetota
TGC
Ala
>WENV180165116
OAVK01000071
235174
Actinomycetota
TGC
Ala
>WENV180165073
OAVK01000036
235174
Actinomycetota
TGC
Ala
>WENV180165524
OAVK01003868
237808
Actinomycetota
TGC
Ala
>WENV180165291
OAVK01000434
144600
Actinomycetota
TGG
Pro
>WENV180165563
OAVK01006435
237804
Actinomycetota
TGT
Thr
>WENV180165236
OAVK01000240
338239
Actinomycetota
TTC
Glu
>WENV180165163
OAVK01000122
338239
Actinomycetota
TTC
Glu
>WENV180165156
OAVK01000115
338239
Actinomycetota
TTC
Glu
>WENV180165517
OAVK01003474
121519
Actinomycetota
TTG
Gln
>WENV180165390
OAVK01001068
413665
Actinomycetota
TTG
Gln
>WENV180165340
OAVK01000691
413665
Actinomycetota
TTG
Gln
>WENV180165232
OAVK01000238
413665
Actinomycetota
TTG
Gln
>WENV180165477
OAVK01002181
147158
Actinomycetota
TTT
Lys
>WENV180165099
OAVK01000056
235101
Actinomycetota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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