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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180184028
OAWR01000282
95593
Actinomycetota
>WENV180183956
OAWR01000055
95593
Actinomycetota
>WENV180183913
OAWR01000004
158720
Actinomycetota
ACG
Arg
>WENV180183914
OAWR01000004
158720
Actinomycetota
ACG
Arg
>WENV180183973
OAWR01000100
158720
Actinomycetota
ACG
Arg
>WENV180183911
OAWR01000004
144595
Actinomycetota
CAA
Leu
>WENV180183909
OAWR01000002
144595
Actinomycetota
CAA
Leu
>WENV180183926
OAWR01000012
235199
Actinomycetota
CAC
Val
>WENV180183934
OAWR01000019
267574
Actinomycetota
CAC
Val
>WENV180184060
OAWR01000416
80622
Actinomycetota
CAG
Leu
>WENV180183969
OAWR01000085
80622
Actinomycetota
CAG
Leu
>WENV180183957
OAWR01000055
144700
Actinomycetota
CAT
Met
>WENV180183950
OAWR01000043
144825
Actinomycetota
CAT
Met
>WENV180184131
OAWR01001671
145269
Actinomycetota
CAT
Met
>WENV180184069
OAWR01000469
163948
Actinomycetota
CAT
Met
>WENV180183971
OAWR01000096
411601
Actinomycetota
CCC
Gly
>WENV180184128
OAWR01001362
411554
Actinomycetota
CCC
Gly
>WENV180184057
OAWR01000384
411554
Actinomycetota
CCC
Gly
>WENV180183968
OAWR01000084
411554
Actinomycetota
CCC
Gly
>WENV180183923
OAWR01000012
254857
Actinomycetota
CCG
Arg
>WENV180184004
OAWR01000179
237794
Actinomycetota
CCG
Arg
>WENV180183922
OAWR01000010
237792
Actinomycetota
CCT
Arg
>WENV180183962
OAWR01000060
235348
Actinomycetota
CCT
Arg
>WENV180184083
OAWR01000774
235149
Actinomycetota
CCT
Arg
>WENV180184007
OAWR01000191
44862
Actinomycetota
CGA
Ser
>WENV180183981
OAWR01000123
45147
Actinomycetota
CGA
Ser
>WENV180183966
OAWR01000067
235146
Actinomycetota
CGT
Thr
>WENV180183964
OAWR01000067
313386
Actinomycetota
CGT
Thr
>WENV180183929
OAWR01000016
235121
Actinomycetota
CGT
Thr
>WENV180183976
OAWR01000110
295695
Actinomycetota
CTC
Glu
>WENV180183903
OAWR01000001
295695
Actinomycetota
CTC
Glu
>WENV180183977
OAWR01000110
338148
Actinomycetota
CTG
Gln
>WENV180183904
OAWR01000001
338148
Actinomycetota
CTG
Gln
>WENV180184154
OAWR01011736
414234
Actinomycetota
CTG
Gln
>WENV180183906
OAWR01000001
201717
Actinomycetota
CTT
Lys
>WENV180183989
OAWR01000150
201717
Actinomycetota
CTT
Lys
>WENV180184178
OAWR01022726
239204
Actinomycetota
CTT
Lys
>WENV180183925
OAWR01000012
356045
Actinomycetota
GAC
Val
>WENV180183948
OAWR01000032
16400
Actinomycetota
GAG
Leu
>WENV180184013
OAWR01000214
16222
Actinomycetota
GAG
Leu
>WENV180184080
OAWR01000639
174149
Actinomycetota
GAT
Ile
>WENV180183958
OAWR01000055
23370
Actinomycetota
GCT
Ser
>WENV180184010
OAWR01000196
53078
Actinomycetota
GGA
Ser
>WENV180183907
OAWR01000001
53078
Actinomycetota
GGA
Ser
>WENV180184138
OAWR01003083
47164
Actinomycetota
GGA
Ser
>WENV180183988
OAWR01000145
47164
Actinomycetota
GGA
Ser
>WENV180183986
OAWR01000129
235347
Actinomycetota
GGC
Ala
>WENV180183987
OAWR01000129
235347
Actinomycetota
GGC
Ala
>WENV180184078
OAWR01000580
235173
Actinomycetota
GGC
Ala
>WENV180184018
OAWR01000242
235173
Actinomycetota
GGC
Ala
>WENV180183939
OAWR01000030
235173
Actinomycetota
GGC
Ala
>WENV180183983
OAWR01000125
144826
Actinomycetota
GGG
Pro
>WENV180183936
OAWR01000019
144826
Actinomycetota
GGG
Pro
>WENV180184014
OAWR01000222
98279
Actinomycetota
GTA
Tyr
>WENV180183952
OAWR01000049
235194
Actinomycetota
GTG
His
>WENV180184157
OAWR01012491
235148
Actinomycetota
GTT
Asn
>WENV180184108
OAWR01001072
235148
Actinomycetota
GTT
Asn
>WENV180183992
OAWR01000155
243162
Actinomycetota
GTT
Asn
>WENV180183991
OAWR01000155
243162
Actinomycetota
GTT
Asn
>WENV180183990
OAWR01000155
243162
Actinomycetota
GTT
Asn
>WENV180183921
OAWR01000007
243162
Actinomycetota
GTT
Asn
>WENV180183908
OAWR01000002
121510
Actinomycetota
TAA
Leu
>WENV180184044
OAWR01000312
113702
Actinomycetota
TAA
Leu
>WENV180184039
OAWR01000299
119485
Actinomycetota
TAA
Leu
>WENV180183951
OAWR01000045
145345
Actinomycetota
TAC
Val
>WENV180183963
OAWR01000065
144660
Actinomycetota
TAC
Val
>WENV180183930
OAWR01000016
113703
Actinomycetota
TAG
Leu
>WENV180183965
OAWR01000067
113601
Actinomycetota
TAG
Leu
>WENV180184077
OAWR01000579
145423
Actinomycetota
TCT
Arg
>WENV180184000
OAWR01000164
144823
Actinomycetota
TCT
Arg
>WENV180183955
OAWR01000054
144823
Actinomycetota
TCT
Arg
>WENV180183918
OAWR01000006
44855
Actinomycetota
TGA
Ser
>WENV180184135
OAWR01002354
44942
Actinomycetota
TGA
Ser
>WENV180183949
OAWR01000036
51286
Actinomycetota
TGA
Ser
>WENV180184081
OAWR01000639
235174
Actinomycetota
TGC
Ala
>WENV180183910
OAWR01000002
163764
Actinomycetota
TGG
Pro
>WENV180184129
OAWR01001367
144635
Actinomycetota
TGG
Pro
>WENV180183954
OAWR01000050
338239
Actinomycetota
TTC
Glu
>WENV180183916
OAWR01000006
338239
Actinomycetota
TTC
Glu
>WENV180183985
OAWR01000129
413665
Actinomycetota
TTG
Gln
>WENV180183938
OAWR01000030
413665
Actinomycetota
TTG
Gln
>WENV180184056
OAWR01000346
235101
Actinomycetota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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