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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180312898
OBJZ01001741
243275
Actinomycetota
CCT
Arg
>WENV180312925
OBJZ01002921
235615
Actinomycetota
TGC
Ala
>WENV180312661
OBJZ01000036
413566
Actinomycetota
CCC
Gly
>WENV180312992
OBJZ01017363
37831
Actinomycetota
GGA
Ser
>WENV180312900
OBJZ01001847
235605
Actinomycetota
CGT
Thr
>WENV180312977
OBJZ01011247
145084
Actinomycetota
GGG
Pro
>WENV180312591
OBJZ01000011
238330
Actinomycetota
CTC
Glu
>WENV180312990
OBJZ01016223
241627
Actinomycetota
>WENV180312981
OBJZ01013087
338474
Actinomycetota
CAT
Met
>WENV180312626
OBJZ01000016
149271
Actinomycetota
CAT
Met
>WENV180312842
OBJZ01000381
243340
Actinomycetota
TTT
Lys
>WENV180312973
OBJZ01007986
176229
Actinomycetota
CAA
Leu
>WENV180312901
OBJZ01001848
235384
Actinomycetota
GTG
His
>WENV180312843
OBJZ01000396
147615
Actinomycetota
GAT
Ile
>WENV180312587
OBJZ01000011
238328
Actinomycetota
GTG
His
>WENV180312538
OBJZ01000003
163710
Actinomycetota
CGG
Pro
>WENV180312549
OBJZ01000003
412384
Actinomycetota
CCC
Gly
>WENV180312615
OBJZ01000015
162402
Actinomycetota
GGG
Pro
>WENV180312714
OBJZ01000057
147617
Actinomycetota
CAT
Met
>WENV180312919
OBJZ01002052
412586
Actinomycetota
CCC
Gly
>WENV180312899
OBJZ01001747
235609
Actinomycetota
CTT
Lys
>WENV180312715
OBJZ01000057
147610
Actinomycetota
CTT
Lys
>WENV180312679
OBJZ01000046
147610
Actinomycetota
CTT
Lys
>WENV180312655
OBJZ01000033
236216
Actinomycetota
GGC
Ala
>WENV180312594
OBJZ01000011
37243
Actinomycetota
GAG
Leu
>WENV180312819
OBJZ01000186
345416
Actinomycetota
CTG
Gln
>WENV180312976
OBJZ01010899
238649
Actinomycetota
TAC
Val
>WENV180312663
OBJZ01000036
277617
Actinomycetota
ACG
Arg
>WENV180312660
OBJZ01000036
147609
Actinomycetota
GTC
Asp
>WENV180312712
OBJZ01000057
101417
Actinomycetota
GTA
Tyr
>WENV180312821
OBJZ01000187
243579
Actinomycetota
CGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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