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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180322734
OBKR01005469
176499
Actinomycetota
CAT
Met
>WENV180322733
OBKR01005469
117903
Actinomycetota
GTA
Tyr
>WENV180322753
OBKR01005714
175843
Actinomycetota
CAA
Leu
>WENV180322816
OBKR01006850
480319
Actinomycetota
TTG
Gln
>WENV180322830
OBKR01007071
175872
Actinomycetota
GTC
Asp
>WENV180322860
OBKR01007498
175837
Actinomycetota
ACG
Arg
>WENV180322926
OBKR01008687
280450
Actinomycetota
TTT
Lys
>WENV180322942
OBKR01009209
20205
Actinomycetota
GCT
Ser
>WENV180322971
OBKR01009940
280499
Actinomycetota
CCT
Arg
>WENV180323128
OBKR01014859
280702
Actinomycetota
GGC
Ala
>WENV180323127
OBKR01014859
280524
Actinomycetota
TGC
Ala
>WENV180323161
OBKR01016210
179231
Actinomycetota
TAC
Val
>WENV180323169
OBKR01016426
175882
Actinomycetota
TGG
Pro
>WENV180323195
OBKR01017337
176638
Actinomycetota
GGG
Pro
>WENV180323364
OBKR01026479
140768
Actinomycetota
TAG
Leu
>WENV180323363
OBKR01026479
280470
Actinomycetota
CGT
Thr
>WENV180323383
OBKR01027533
104211
Actinomycetota
CAG
Leu
>WENV180323459
OBKR01033773
398853
Actinomycetota
CTG
Gln
>WENV180323538
OBKR01042019
56071
Actinomycetota
TGA
Ser
>WENV180323564
OBKR01044153
175841
Actinomycetota
TAT
Ile
>WENV180323648
OBKR01054033
147796
Actinomycetota
TAA
Leu
>WENV180323650
OBKR01054152
280441
Actinomycetota
CCG
Arg
>WENV180323737
OBKR01065280
20209
Actinomycetota
GAG
Leu
>WENV180323791
OBKR01075491
46642
Actinomycetota
CGA
Ser
>WENV180323800
OBKR01076520
480329
Actinomycetota
CCC
Gly
>WENV180323827
OBKR01081800
280498
Actinomycetota
GTT
Asn
>WENV180323909
OBKR01096856
175883
Actinomycetota
GAT
Ile
>WENV180324046
OBKR01132179
291585
Actinomycetota
GCC
Gly
>WENV180324060
OBKR01136176
280503
Actinomycetota
CCT
Arg
>WENV180324298
OBKR01250414
56075
Actinomycetota
TGA
Ser
>WENV180324341
OBKR01295158
280536
Actinomycetota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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