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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180364175
OBNZ01123911
240825
Actinomycetota
GTG
His
>WENV180363855
OBNZ01013076
45128
Actinomycetota
GGA
Ser
>WENV180364230
OBNZ01159821
127865
Actinomycetota
GAT
Ile
>WENV180364100
OBNZ01089407
338505
Actinomycetota
TAC
Val
>WENV180363929
OBNZ01026858
145239
Actinomycetota
CAT
Met
>WENV180363858
OBNZ01013133
248046
Actinomycetota
CCA
Trp
>WENV180364206
OBNZ01138093
243274
Actinomycetota
GGT
Thr
>WENV180364082
OBNZ01074759
342992
Actinomycetota
GTT
Asn
>WENV180363768
OBNZ01005779
413961
Actinomycetota
GCA
Cys
>WENV180363899
OBNZ01020149
268346
Actinomycetota
GGC
Ala
>WENV180363769
OBNZ01005779
344380
Actinomycetota
GAC
Val
>WENV180364231
OBNZ01159821
235444
Actinomycetota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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