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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
119 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180491972
OBZW01000132
176499
Actinomycetota
CAT
Met
>WENV180492018
OBZW01000178
176499
Actinomycetota
CAT
Met
>WENV180491887
OBZW01000069
175883
Actinomycetota
GAT
Ile
>WENV180491889
OBZW01000069
175883
Actinomycetota
GAT
Ile
>WENV180492029
OBZW01000185
175907
Actinomycetota
TAC
Val
>WENV180492001
OBZW01000161
283311
Actinomycetota
CCT
Arg
>WENV180492510
OBZW01022657
31036
Actinomycetota
GCT
Ser
>WENV180491858
OBZW01000055
349003
Actinomycetota
CCG
Arg
>WENV180492165
OBZW01000435
147806
Actinomycetota
TAA
Leu
>WENV180491895
OBZW01000070
280498
Actinomycetota
GTT
Asn
>WENV180491896
OBZW01000070
280498
Actinomycetota
GTT
Asn
>WENV180491898
OBZW01000070
280498
Actinomycetota
GTT
Asn
>WENV180492265
OBZW01000973
280498
Actinomycetota
GTT
Asn
>WENV180492266
OBZW01000973
280498
Actinomycetota
GTT
Asn
>WENV180491998
OBZW01000159
316729
Actinomycetota
CAC
Val
>WENV180491915
OBZW01000082
316729
Actinomycetota
CAC
Val
>WENV180492246
OBZW01000819
280503
Actinomycetota
CCT
Arg
>WENV180491969
OBZW01000131
295964
Actinomycetota
GTT
Asn
>WENV180492267
OBZW01000973
295964
Actinomycetota
GTT
Asn
>WENV180492142
OBZW01000400
56083
Actinomycetota
CGA
Ser
>WENV180491941
OBZW01000101
140768
Actinomycetota
TAG
Leu
>WENV180491980
OBZW01000139
56384
Actinomycetota
TGA
Ser
>WENV180492061
OBZW01000216
176075
Actinomycetota
TCT
Arg
>WENV180492162
OBZW01000429
176075
Actinomycetota
TCT
Arg
>WENV180492000
OBZW01000159
176078
Actinomycetota
GGG
Pro
>WENV180492124
OBZW01000362
20208
Actinomycetota
GAG
Leu
>WENV180492112
OBZW01000307
482604
Actinomycetota
TTG
Gln
>WENV180492212
OBZW01000705
482604
Actinomycetota
TTG
Gln
>WENV180492150
OBZW01000421
152047
Actinomycetota
ACG
Arg
>WENV180491902
OBZW01000077
59689
Actinomycetota
GGA
Ser
>WENV180491821
OBZW01000025
175837
Actinomycetota
ACG
Arg
>WENV180491822
OBZW01000025
175837
Actinomycetota
ACG
Arg
>WENV180491924
OBZW01000090
175837
Actinomycetota
ACG
Arg
>WENV180492523
OBZW01026095
175837
Actinomycetota
ACG
Arg
>WENV180492198
OBZW01000581
29393
Actinomycetota
GCT
Ser
>WENV180492526
OBZW01026147
280549
Actinomycetota
CAC
Val
>WENV180492361
OBZW01002697
443526
Actinomycetota
CAC
Val
>WENV180492199
OBZW01000593
24925
Actinomycetota
GCT
Ser
>WENV180491904
OBZW01000077
349164
Actinomycetota
CTC
Glu
>WENV180492287
OBZW01001101
349164
Actinomycetota
CTC
Glu
>WENV180491979
OBZW01000139
56383
Actinomycetota
CGA
Ser
>WENV180492213
OBZW01000705
280702
Actinomycetota
GGC
Ala
>WENV180492214
OBZW01000705
280702
Actinomycetota
GGC
Ala
>WENV180492070
OBZW01000231
140878
Actinomycetota
TAA
Leu
>WENV180492045
OBZW01000208
398843
Actinomycetota
GTT
Asn
>WENV180492046
OBZW01000208
398843
Actinomycetota
GTT
Asn
>WENV180492194
OBZW01000545
176077
Actinomycetota
CAT
Met
>WENV180492144
OBZW01000412
298224
Actinomycetota
GGC
Ala
>WENV180492176
OBZW01000463
283312
Actinomycetota
GTG
His
>WENV180492027
OBZW01000182
241064
Actinomycetota
CTC
Glu
>WENV180492028
OBZW01000182
241064
Actinomycetota
CTC
Glu
>WENV180492446
OBZW01006832
241064
Actinomycetota
CTC
Glu
>WENV180491856
OBZW01000053
176638
Actinomycetota
GGG
Pro
>WENV180491909
OBZW01000079
280524
Actinomycetota
TGC
Ala
>WENV180492050
OBZW01000210
280524
Actinomycetota
TGC
Ala
>WENV180492184
OBZW01000492
280524
Actinomycetota
TGC
Ala
>WENV180492337
OBZW01002109
481719
Actinomycetota
GCA
Cys
>WENV180492145
OBZW01000414
283313
Actinomycetota
CCG
Arg
>WENV180491926
OBZW01000091
398948
Actinomycetota
TTC
Glu
>WENV180492128
OBZW01000370
398948
Actinomycetota
TTC
Glu
>WENV180491820
OBZW01000025
176723
Actinomycetota
TCT
Arg
>WENV180492154
OBZW01000421
480374
Actinomycetota
TTG
Gln
>WENV180492336
OBZW01002109
291585
Actinomycetota
GCC
Gly
>WENV180492431
OBZW01005433
291585
Actinomycetota
GCC
Gly
>WENV180492130
OBZW01000371
150272
Actinomycetota
TAA
Leu
>WENV180491971
OBZW01000132
117777
Actinomycetota
>WENV180492250
OBZW01000840
117777
Actinomycetota
>WENV180491897
OBZW01000070
280523
Actinomycetota
GGC
Ala
>WENV180491916
OBZW01000082
280523
Actinomycetota
GGC
Ala
>WENV180492051
OBZW01000210
280523
Actinomycetota
GGC
Ala
>WENV180492113
OBZW01000307
280523
Actinomycetota
GGC
Ala
>WENV180491900
OBZW01000073
227544
Actinomycetota
TAC
Val
>WENV180491959
OBZW01000115
176555
Actinomycetota
CAT
Met
>WENV180492513
OBZW01025671
186871
Actinomycetota
CTT
Lys
>WENV180492107
OBZW01000294
191955
Actinomycetota
TGT
Thr
>WENV180492500
OBZW01016034
175841
Actinomycetota
TAT
Ile
>WENV180492469
OBZW01009273
221845
Actinomycetota
GAT
Ile
>WENV180491933
OBZW01000098
20415
Actinomycetota
GAG
Leu
>WENV180491987
OBZW01000147
280536
Actinomycetota
CTT
Lys
>WENV180491988
OBZW01000147
280536
Actinomycetota
CTT
Lys
>WENV180492293
OBZW01001254
280496
Actinomycetota
CGT
Thr
>WENV180492117
OBZW01000330
280703
Actinomycetota
CCT
Arg
>WENV180491957
OBZW01000113
140879
Actinomycetota
TAG
Leu
>WENV180492466
OBZW01008563
285877
Actinomycetota
CCG
Arg
>WENV180492308
OBZW01001582
184157
Actinomycetota
TGG
Pro
>WENV180491890
OBZW01000069
175926
Actinomycetota
CAT
Met
>WENV180491929
OBZW01000091
178569
Actinomycetota
CAT
Met
>WENV180491901
OBZW01000075
280450
Actinomycetota
TTT
Lys
>WENV180492447
OBZW01007038
323758
Actinomycetota
CGT
Thr
>WENV180491953
OBZW01000112
56166
Actinomycetota
TGA
Ser
>WENV180491903
OBZW01000077
480329
Actinomycetota
CCC
Gly
>WENV180491982
OBZW01000141
480329
Actinomycetota
CCC
Gly
>WENV180492445
OBZW01006832
483206
Actinomycetota
CTG
Gln
>WENV180492449
OBZW01007070
131892
Actinomycetota
GTA
Tyr
>WENV180492133
OBZW01000383
175882
Actinomycetota
TGG
Pro
>WENV180491922
OBZW01000087
20209
Actinomycetota
GAG
Leu
>WENV180492451
OBZW01007070
180945
Actinomycetota
CAT
Met
>WENV180492215
OBZW01000730
99865
Actinomycetota
CAG
Leu
>WENV180491912
OBZW01000082
222475
Actinomycetota
CTT
Lys
>WENV180492164
OBZW01000434
222475
Actinomycetota
CTT
Lys
>WENV180491857
OBZW01000053
480319
Actinomycetota
TTG
Gln
>WENV180492522
OBZW01026091
480319
Actinomycetota
TTG
Gln
>WENV180492257
OBZW01000879
280499
Actinomycetota
CCT
Arg
>WENV180491905
OBZW01000077
398853
Actinomycetota
CTG
Gln
>WENV180491939
OBZW01000101
398853
Actinomycetota
CTG
Gln
>WENV180492288
OBZW01001101
398853
Actinomycetota
CTG
Gln
>WENV180492132
OBZW01000383
176642
Actinomycetota
CAA
Leu
>WENV180492059
OBZW01000215
175843
Actinomycetota
CAA
Leu
>WENV180492244
OBZW01000800
175843
Actinomycetota
CAA
Leu
>WENV180492262
OBZW01000942
56075
Actinomycetota
TGA
Ser
>WENV180491981
OBZW01000141
104211
Actinomycetota
CAG
Leu
>WENV180491925
OBZW01000090
178568
Actinomycetota
ACG
Arg
>WENV180492017
OBZW01000178
117903
Actinomycetota
GTA
Tyr
>WENV180492183
OBZW01000492
179238
Actinomycetota
GAT
Ile
>WENV180491940
OBZW01000101
280470
Actinomycetota
CGT
Thr
>WENV180491956
OBZW01000113
280470
Actinomycetota
CGT
Thr
>WENV180492334
OBZW01002102
480376
Actinomycetota
CCC
Gly
>WENV180492475
OBZW01011230
482493
Actinomycetota
CCC
Gly
>WENV180491839
OBZW01000038
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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