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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
99 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180515260
OCHC01000017
144636
Actinomycetota
GAT
Ile
>WENV180515262
OCHC01000017
144636
Actinomycetota
GAT
Ile
>WENV180515264
OCHC01000017
235153
Actinomycetota
CCT
Arg
>WENV180515305
OCHC01000038
338139
Actinomycetota
GTT
Asn
>WENV180515306
OCHC01000038
338139
Actinomycetota
GTT
Asn
>WENV180515340
OCHC01000067
158513
Actinomycetota
TGG
Pro
>WENV180515363
OCHC01000080
245301
Actinomycetota
GCC
Gly
>WENV180515364
OCHC01000080
412834
Actinomycetota
GCA
Cys
>WENV180515365
OCHC01000080
245301
Actinomycetota
GCC
Gly
>WENV180515366
OCHC01000080
245301
Actinomycetota
GCC
Gly
>WENV180515414
OCHC01000097
235092
Actinomycetota
CCG
Arg
>WENV180515476
OCHC01000154
144589
Actinomycetota
ACG
Arg
>WENV180515477
OCHC01000154
144589
Actinomycetota
ACG
Arg
>WENV180515482
OCHC01000158
235101
Actinomycetota
TTT
Lys
>WENV180515500
OCHC01000179
235173
Actinomycetota
GGC
Ala
>WENV180515508
OCHC01000191
119485
Actinomycetota
TAA
Leu
>WENV180515509
OCHC01000191
144595
Actinomycetota
CAA
Leu
>WENV180515510
OCHC01000191
144635
Actinomycetota
TGG
Pro
>WENV180515526
OCHC01000210
338148
Actinomycetota
CTG
Gln
>WENV180515534
OCHC01000221
176456
Actinomycetota
TCT
Arg
>WENV180515540
OCHC01000226
61501
Actinomycetota
CAG
Leu
>WENV180515567
OCHC01000249
145343
Actinomycetota
GGG
Pro
>WENV180515574
OCHC01000263
16223
Actinomycetota
GAG
Leu
>WENV180515595
OCHC01000297
235121
Actinomycetota
CGT
Thr
>WENV180515596
OCHC01000297
113601
Actinomycetota
TAG
Leu
>WENV180515605
OCHC01000316
235148
Actinomycetota
GTT
Asn
>WENV180515606
OCHC01000316
235148
Actinomycetota
GTT
Asn
>WENV180515610
OCHC01000322
44851
Actinomycetota
TGA
Ser
>WENV180515612
OCHC01000322
144625
Actinomycetota
GTC
Asp
>WENV180515614
OCHC01000322
37070
Actinomycetota
CGA
Ser
>WENV180515615
OCHC01000324
16223
Actinomycetota
GAG
Leu
>WENV180515658
OCHC01000403
414234
Actinomycetota
CTG
Gln
>WENV180515665
OCHC01000408
153948
Actinomycetota
GGG
Pro
>WENV180515694
OCHC01000457
144826
Actinomycetota
GGG
Pro
>WENV180515704
OCHC01000490
145343
Actinomycetota
GGG
Pro
>WENV180515712
OCHC01000512
166493
Actinomycetota
CTT
Lys
>WENV180515722
OCHC01000532
16222
Actinomycetota
GAG
Leu
>WENV180515730
OCHC01000545
121510
Actinomycetota
TAA
Leu
>WENV180515731
OCHC01000545
144595
Actinomycetota
CAA
Leu
>WENV180515804
OCHC01000714
254857
Actinomycetota
CCG
Arg
>WENV180515825
OCHC01000755
80622
Actinomycetota
CAG
Leu
>WENV180515829
OCHC01000772
235149
Actinomycetota
CCT
Arg
>WENV180515838
OCHC01000803
95593
Actinomycetota
>WENV180515839
OCHC01000803
144700
Actinomycetota
CAT
Met
>WENV180515840
OCHC01000803
23370
Actinomycetota
GCT
Ser
>WENV180515859
OCHC01000858
144823
Actinomycetota
TCT
Arg
>WENV180515861
OCHC01000860
235101
Actinomycetota
TTT
Lys
>WENV180515866
OCHC01000875
235149
Actinomycetota
CCT
Arg
>WENV180515867
OCHC01000877
235121
Actinomycetota
CGT
Thr
>WENV180515868
OCHC01000877
113601
Actinomycetota
TAG
Leu
>WENV180515869
OCHC01000877
235146
Actinomycetota
CGT
Thr
>WENV180515872
OCHC01000884
44862
Actinomycetota
CGA
Ser
>WENV180515885
OCHC01000945
338148
Actinomycetota
CTG
Gln
>WENV180515888
OCHC01000954
44855
Actinomycetota
TGA
Ser
>WENV180515893
OCHC01000970
158720
Actinomycetota
ACG
Arg
>WENV180515894
OCHC01000970
158720
Actinomycetota
ACG
Arg
>WENV180515902
OCHC01000999
145423
Actinomycetota
TCT
Arg
>WENV180515907
OCHC01001025
145345
Actinomycetota
TAC
Val
>WENV180515908
OCHC01001034
254857
Actinomycetota
CCG
Arg
>WENV180515910
OCHC01001044
44942
Actinomycetota
TGA
Ser
>WENV180515929
OCHC01001103
16219
Actinomycetota
GCT
Ser
>WENV180515988
OCHC01001387
235148
Actinomycetota
GTT
Asn
>WENV180515996
OCHC01001449
413665
Actinomycetota
TTG
Gln
>WENV180515997
OCHC01001449
235347
Actinomycetota
GGC
Ala
>WENV180515998
OCHC01001449
235347
Actinomycetota
GGC
Ala
>WENV180516004
OCHC01001480
80622
Actinomycetota
CAG
Leu
>WENV180516005
OCHC01001486
235148
Actinomycetota
GTT
Asn
>WENV180516006
OCHC01001486
235148
Actinomycetota
GTT
Asn
>WENV180516023
OCHC01001537
144593
Actinomycetota
TAT
Ile
>WENV180516034
OCHC01001605
235174
Actinomycetota
TGC
Ala
>WENV180516035
OCHC01001605
235173
Actinomycetota
GGC
Ala
>WENV180516045
OCHC01001615
98279
Actinomycetota
GTA
Tyr
>WENV180516060
OCHC01001713
162208
Actinomycetota
TAC
Val
>WENV180516097
OCHC01001879
144660
Actinomycetota
TAC
Val
>WENV180516107
OCHC01001935
144589
Actinomycetota
ACG
Arg
>WENV180516108
OCHC01001935
144589
Actinomycetota
ACG
Arg
>WENV180516119
OCHC01001988
235348
Actinomycetota
CCT
Arg
>WENV180516145
OCHC01002217
144825
Actinomycetota
CAT
Met
>WENV180516159
OCHC01002305
356045
Actinomycetota
GAC
Val
>WENV180516170
OCHC01002408
47164
Actinomycetota
GGA
Ser
>WENV180516175
OCHC01002460
235174
Actinomycetota
TGC
Ala
>WENV180516176
OCHC01002460
235173
Actinomycetota
GGC
Ala
>WENV180516187
OCHC01002638
145269
Actinomycetota
CAT
Met
>WENV180516235
OCHC01002956
80622
Actinomycetota
CAG
Leu
>WENV180516243
OCHC01003027
235173
Actinomycetota
GGC
Ala
>WENV180516252
OCHC01003162
144600
Actinomycetota
TGG
Pro
>WENV180516258
OCHC01003206
235194
Actinomycetota
GTG
His
>WENV180516264
OCHC01003266
16219
Actinomycetota
GCT
Ser
>WENV180516299
OCHC01003815
144635
Actinomycetota
TGG
Pro
>WENV180516336
OCHC01004173
235121
Actinomycetota
CGT
Thr
>WENV180516337
OCHC01004173
113601
Actinomycetota
TAG
Leu
>WENV180516353
OCHC01004342
411601
Actinomycetota
CCC
Gly
>WENV180516367
OCHC01004555
119475
Actinomycetota
TAA
Leu
>WENV180516381
OCHC01004783
356045
Actinomycetota
GAC
Val
>WENV180516382
OCHC01004783
235199
Actinomycetota
CAC
Val
>WENV180516392
OCHC01004948
235101
Actinomycetota
TTT
Lys
>WENV180516419
OCHC01005550
411554
Actinomycetota
CCC
Gly
>WENV180516471
OCHC01006982
145347
Actinomycetota
CAA
Leu
>WENV180516540
OCHC01010915
243162
Actinomycetota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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