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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180558754
OCKA01000011
283327
Actinomycetota
TGC
Ala
>WENV180558832
OCKA01000031
178581
Actinomycetota
TAC
Val
>WENV180558834
OCKA01000031
283331
Actinomycetota
CTC
Glu
>WENV180558833
OCKA01000031
400420
Actinomycetota
CTG
Gln
>WENV180558841
OCKA01000034
400421
Actinomycetota
GAC
Val
>WENV180558840
OCKA01000034
504131
Actinomycetota
GCA
Cys
>WENV180558842
OCKA01000035
283322
Actinomycetota
CGT
Thr
>WENV180558864
OCKA01000052
283336
Actinomycetota
GGT
Thr
>WENV180558865
OCKA01000052
399203
Actinomycetota
CAT
Met
>WENV180558868
OCKA01000055
283335
Actinomycetota
CTT
Lys
>WENV180558887
OCKA01000071
481050
Actinomycetota
CCC
Gly
>WENV180558895
OCKA01000078
178580
Actinomycetota
GAA
Phe
>WENV180558894
OCKA01000078
178579
Actinomycetota
GTC
Asp
>WENV180558896
OCKA01000078
178582
Actinomycetota
TTT
Lys
>WENV180558897
OCKA01000086
46790
Actinomycetota
GAG
Leu
>WENV180558900
OCKA01000088
283329
Actinomycetota
GTG
His
>WENV180558903
OCKA01000096
100162
Actinomycetota
TGA
Ser
>WENV180558905
OCKA01000096
300986
Actinomycetota
ACG
Arg
>WENV180558906
OCKA01000096
56387
Actinomycetota
CGA
Ser
>WENV180558913
OCKA01000102
283323
Actinomycetota
TGT
Thr
>WENV180558953
OCKA01000171
100161
Actinomycetota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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