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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180883888
ODMC01020201
388111
Actinomycetota
>WENV180883601
ODMC01009447
246365
Actinomycetota
ACG
Arg
>WENV180884248
ODMC01067892
144595
Actinomycetota
CAA
Leu
>WENV180884424
ODMC01137601
235199
Actinomycetota
CAC
Val
>WENV180882695
ODMC01000357
59716
Actinomycetota
CAG
Leu
>WENV180882714
ODMC01000390
161605
Actinomycetota
CAT
Met
>WENV180883400
ODMC01004687
241401
Actinomycetota
CCA
Trp
>WENV180884421
ODMC01136945
431657
Actinomycetota
CCC
Gly
>WENV180882888
ODMC01000846
246222
Actinomycetota
CCG
Arg
>WENV180882794
ODMC01000534
261773
Actinomycetota
CCT
Arg
>WENV180884521
ODMC01179586
240124
Actinomycetota
CGT
Thr
>WENV180883801
ODMC01016840
240124
Actinomycetota
CGT
Thr
>WENV180882881
ODMC01000825
150473
Actinomycetota
CTC
Glu
>WENV180884001
ODMC01030462
293092
Actinomycetota
CTC
Glu
>WENV180883998
ODMC01030382
239204
Actinomycetota
CTT
Lys
>WENV180883267
ODMC01003291
246299
Actinomycetota
CTT
Lys
>WENV180883266
ODMC01003291
246299
Actinomycetota
CTT
Lys
>WENV180882825
ODMC01000617
241408
Actinomycetota
CTT
Lys
>WENV180883885
ODMC01020201
392594
Actinomycetota
GAC
Val
>WENV180882868
ODMC01000765
392594
Actinomycetota
GAC
Val
>WENV180882829
ODMC01000628
392594
Actinomycetota
GAC
Val
>WENV180882693
ODMC01000357
152190
Actinomycetota
GAT
Ile
>WENV180883350
ODMC01004059
314498
Actinomycetota
GGC
Ala
>WENV180884017
ODMC01032095
314498
Actinomycetota
GGC
Ala
>WENV180884062
ODMC01035977
314498
Actinomycetota
GGC
Ala
>WENV180884308
ODMC01078803
314498
Actinomycetota
GGC
Ala
>WENV180882869
ODMC01000765
158373
Actinomycetota
GGG
Pro
>WENV180883913
ODMC01022890
162402
Actinomycetota
GGG
Pro
>WENV180883896
ODMC01021294
162402
Actinomycetota
GGG
Pro
>WENV180883718
ODMC01013102
162402
Actinomycetota
GGG
Pro
>WENV180883705
ODMC01012802
149270
Actinomycetota
GTC
Asp
>WENV180884396
ODMC01120305
235194
Actinomycetota
GTG
His
>WENV180883181
ODMC01002261
246015
Actinomycetota
GTG
His
>WENV180882864
ODMC01000745
412870
Actinomycetota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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