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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180906404
ODPM01001199
283336
Actinomycetota
GGT
Thr
>WENV180906433
ODPM01008646
280978
Actinomycetota
CGT
Thr
>WENV180906403
ODPM01001199
118279
Actinomycetota
GTA
Tyr
>WENV180906413
ODPM01001582
178581
Actinomycetota
TAC
Val
>WENV180906418
ODPM01002415
400421
Actinomycetota
GAC
Val
>WENV180906410
ODPM01001403
283331
Actinomycetota
CTC
Glu
>WENV180906405
ODPM01001199
399203
Actinomycetota
CAT
Met
>WENV180906387
ODPM01000316
178580
Actinomycetota
GAA
Phe
>WENV180906415
ODPM01001721
342697
Actinomycetota
TGC
Ala
>WENV180906409
ODPM01001403
436761
Actinomycetota
CTG
Gln
>WENV180906386
ODPM01000316
178579
Actinomycetota
GTC
Asp
>WENV180906395
ODPM01000553
283329
Actinomycetota
GTG
His
>WENV180906422
ODPM01002917
283335
Actinomycetota
CTT
Lys
>WENV180906411
ODPM01001408
100161
Actinomycetota
CAG
Leu
>WENV180906421
ODPM01002634
300986
Actinomycetota
ACG
Arg
>WENV180906382
ODPM01000063
56387
Actinomycetota
CGA
Ser
>WENV180906435
ODPM01009597
197533
Actinomycetota
CAT
Met
>WENV180906408
ODPM01001346
504131
Actinomycetota
GCA
Cys
>WENV180906396
ODPM01000587
178582
Actinomycetota
TTT
Lys
>WENV180906385
ODPM01000219
283322
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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