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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180917849
ODTE01000006
180096
Actinomycetota
GAT
Ile
>WENV180917850
ODTE01000006
280989
Actinomycetota
TGC
Ala
>WENV180917853
ODTE01000021
47028
Actinomycetota
GGA
Ser
>WENV180917854
ODTE01000046
120845
Actinomycetota
TAG
Leu
>WENV180917855
ODTE01000078
284289
Actinomycetota
CCT
Arg
>WENV180917856
ODTE01000100
304441
Actinomycetota
TTT
Lys
>WENV180917857
ODTE01000100
280944
Actinomycetota
TTC
Glu
>WENV180917858
ODTE01000100
180944
Actinomycetota
GTC
Asp
>WENV180917859
ODTE01000100
180944
Actinomycetota
GTC
Asp
>WENV180917860
ODTE01000100
284287
Actinomycetota
GAA
Phe
>WENV180917861
ODTE01000248
280979
Actinomycetota
GGT
Thr
>WENV180917862
ODTE01000248
399188
Actinomycetota
CAT
Met
>WENV180917864
ODTE01000255
280978
Actinomycetota
CGT
Thr
>WENV180917878
ODTE01001158
20516
Actinomycetota
CGA
Ser
>WENV180917880
ODTE01001263
197533
Actinomycetota
CAT
Met
>WENV180917883
ODTE01001920
402794
Actinomycetota
TCC
Gly
>WENV180917884
ODTE01002074
284288
Actinomycetota
TAC
Val
>WENV180917885
ODTE01002298
280740
Actinomycetota
GTG
His
>WENV180917886
ODTE01002319
180097
Actinomycetota
CAA
Leu
>WENV180917887
ODTE01002400
283327
Actinomycetota
TGC
Ala
>WENV180917890
ODTE01002479
400421
Actinomycetota
GAC
Val
>WENV180917891
ODTE01002731
100162
Actinomycetota
TGA
Ser
>WENV180917895
ODTE01003562
46790
Actinomycetota
GAG
Leu
>WENV180917897
ODTE01003635
176352
Actinomycetota
GGG
Pro
>WENV180917898
ODTE01003735
283335
Actinomycetota
CTT
Lys
>WENV180917899
ODTE01003921
180067
Actinomycetota
TAA
Leu
>WENV180917901
ODTE01004657
178802
Actinomycetota
TAA
Leu
>WENV180917902
ODTE01004939
280982
Actinomycetota
CTT
Lys
>WENV180917903
ODTE01004989
283323
Actinomycetota
TGT
Thr
>WENV180917904
ODTE01005006
481452
Actinomycetota
CCC
Gly
>WENV180917905
ODTE01005071
178579
Actinomycetota
GTC
Asp
>WENV180917906
ODTE01005071
178580
Actinomycetota
GAA
Phe
>WENV180917907
ODTE01005216
117851
Actinomycetota
GTA
Tyr
>WENV180917913
ODTE01006590
178582
Actinomycetota
TTT
Lys
>WENV180917916
ODTE01006770
283322
Actinomycetota
CGT
Thr
>WENV180917917
ODTE01006925
184163
Actinomycetota
CAT
Met
>WENV180917918
ODTE01006977
399099
Actinomycetota
>WENV180917921
ODTE01007476
400420
Actinomycetota
CTG
Gln
>WENV180917922
ODTE01007476
283331
Actinomycetota
CTC
Glu
>WENV180917923
ODTE01007729
46893
Actinomycetota
GAG
Leu
>WENV180917924
ODTE01007758
403867
Actinomycetota
CTG
Gln
>WENV180917925
ODTE01007758
287493
Actinomycetota
>WENV180917926
ODTE01007783
486950
Actinomycetota
CCC
Gly
>WENV180917932
ODTE01009152
178581
Actinomycetota
TAC
Val
>WENV180917934
ODTE01010201
281035
Actinomycetota
GTT
Asn
>WENV180917938
ODTE01011970
187433
Actinomycetota
CCG
Arg
>WENV180917939
ODTE01013365
180080
Actinomycetota
GGG
Pro
>WENV180917943
ODTE01014506
118279
Actinomycetota
GTA
Tyr
>WENV180917944
ODTE01014764
202703
Actinomycetota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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