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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180966686
ODUR01000020
283322
Actinomycetota
CGT
Thr
>WENV180966687
ODUR01000021
47028
Actinomycetota
GGA
Ser
>WENV180966689
ODUR01000094
284288
Actinomycetota
TAC
Val
>WENV180966692
ODUR01000194
100162
Actinomycetota
TGA
Ser
>WENV180966694
ODUR01000198
283329
Actinomycetota
GTG
His
>WENV180966695
ODUR01000300
304441
Actinomycetota
TTT
Lys
>WENV180966696
ODUR01000300
280944
Actinomycetota
TTC
Glu
>WENV180966697
ODUR01000300
202982
Actinomycetota
GTC
Asp
>WENV180966700
ODUR01000407
46790
Actinomycetota
GAG
Leu
>WENV180966701
ODUR01000417
178582
Actinomycetota
TTT
Lys
>WENV180966704
ODUR01000559
56387
Actinomycetota
CGA
Ser
>WENV180966705
ODUR01000657
312253
Actinomycetota
TGC
Ala
>WENV180966708
ODUR01000722
117851
Actinomycetota
GTA
Tyr
>WENV180966709
ODUR01000762
280979
Actinomycetota
GGT
Thr
>WENV180966710
ODUR01000762
399188
Actinomycetota
CAT
Met
>WENV180966712
ODUR01000796
24826
Actinomycetota
CGA
Ser
>WENV180966714
ODUR01000852
336201
Actinomycetota
TGT
Thr
>WENV180966715
ODUR01000941
178802
Actinomycetota
TAA
Leu
>WENV180966720
ODUR01001004
400421
Actinomycetota
GAC
Val
>WENV180966721
ODUR01001010
406233
Actinomycetota
CAC
Val
>WENV180966725
ODUR01001260
280978
Actinomycetota
CGT
Thr
>WENV180966729
ODUR01001434
46893
Actinomycetota
GAG
Leu
>WENV180966732
ODUR01001445
284899
Actinomycetota
CCA
Trp
>WENV180966735
ODUR01001661
187433
Actinomycetota
CCG
Arg
>WENV180966737
ODUR01001919
176560
Actinomycetota
CAT
Met
>WENV180966741
ODUR01002475
176317
Actinomycetota
GAT
Ile
>WENV180966743
ODUR01002541
284289
Actinomycetota
CCT
Arg
>WENV180966745
ODUR01002775
178579
Actinomycetota
GTC
Asp
>WENV180966746
ODUR01002775
178580
Actinomycetota
GAA
Phe
>WENV180966751
ODUR01004009
197533
Actinomycetota
CAT
Met
>WENV180966753
ODUR01004459
118279
Actinomycetota
GTA
Tyr
>WENV180966754
ODUR01004459
283336
Actinomycetota
GGT
Thr
>WENV180966755
ODUR01004459
399203
Actinomycetota
CAT
Met
>WENV180966759
ODUR01005157
281035
Actinomycetota
GTT
Asn
>WENV180966760
ODUR01005175
293157
Actinomycetota
GTG
His
>WENV180966761
ODUR01005250
180096
Actinomycetota
GAT
Ile
>WENV180966762
ODUR01005465
486950
Actinomycetota
CCC
Gly
>WENV180966763
ODUR01005749
400420
Actinomycetota
CTG
Gln
>WENV180966764
ODUR01005749
283331
Actinomycetota
CTC
Glu
>WENV180966765
ODUR01005767
180097
Actinomycetota
CAA
Leu
>WENV180966774
ODUR01007803
421837
Actinomycetota
TCC
Gly
>WENV180966779
ODUR01008532
284895
Actinomycetota
TCT
Arg
>WENV180966780
ODUR01008632
337841
Actinomycetota
CTC
Glu
>WENV180966782
ODUR01008788
176352
Actinomycetota
GGG
Pro
>WENV180966787
ODUR01009951
481452
Actinomycetota
CCC
Gly
>WENV180966788
ODUR01010216
120845
Actinomycetota
TAG
Leu
>WENV180966789
ODUR01010327
4035
Actinomycetota
>WENV180966793
ODUR01011404
283327
Actinomycetota
TGC
Ala
>WENV180966795
ODUR01012042
283335
Actinomycetota
CTT
Lys
>WENV180966796
ODUR01012073
280982
Actinomycetota
CTT
Lys
>WENV180966800
ODUR01013248
480461
Actinomycetota
GCA
Cys
>WENV180966802
ODUR01014040
180067
Actinomycetota
TAA
Leu
>WENV180966803
ODUR01014094
400674
Actinomycetota
CTG
Gln
>WENV180966807
ODUR01015067
178581
Actinomycetota
TAC
Val
>WENV180966809
ODUR01015844
100161
Actinomycetota
CAG
Leu
>WENV180966817
ODUR01023284
219862
Actinomycetota
GAA
Phe
>WENV180966819
ODUR01024320
403867
Actinomycetota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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