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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181129886
OEFY01000027
162402
Actinomycetota
GGG
Pro
>WENV181130077
OEFY01000728
314498
Actinomycetota
GGC
Ala
>WENV181130126
OEFY01001103
314498
Actinomycetota
GGC
Ala
>WENV181130145
OEFY01001525
240124
Actinomycetota
CGT
Thr
>WENV181130181
OEFY01001992
239204
Actinomycetota
CTT
Lys
>WENV181130204
OEFY01002805
148467
Actinomycetota
CAT
Met
>WENV181130289
OEFY01004790
392594
Actinomycetota
GAC
Val
>WENV181130292
OEFY01004790
388111
Actinomycetota
>WENV181130329
OEFY01006222
246015
Actinomycetota
GTG
His
>WENV181130345
OEFY01006634
42714
Actinomycetota
GAG
Leu
>WENV181130346
OEFY01006765
246299
Actinomycetota
CTT
Lys
>WENV181130395
OEFY01009931
59716
Actinomycetota
CAG
Leu
>WENV181130419
OEFY01011821
246365
Actinomycetota
ACG
Arg
>WENV181130489
OEFY01015807
239204
Actinomycetota
CTT
Lys
>WENV181130529
OEFY01020262
293092
Actinomycetota
CTC
Glu
>WENV181130696
OEFY01043919
246222
Actinomycetota
CCG
Arg
>WENV181130726
OEFY01053069
241401
Actinomycetota
CCA
Trp
>WENV181130782
OEFY01068651
24777
Actinomycetota
GCT
Ser
>WENV181130811
OEFY01079732
152190
Actinomycetota
GAT
Ile
>WENV181130828
OEFY01094978
241408
Actinomycetota
CTT
Lys
>WENV181130849
OEFY01103492
377770
Actinomycetota
CTG
Gln
>WENV181130873
OEFY01123406
261773
Actinomycetota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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