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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181176796
OEJR01045699
314498
Actinomycetota
GGC
Ala
>WENV181177021
OEJR01127814
158373
Actinomycetota
GGG
Pro
>WENV181176729
OEJR01030016
241401
Actinomycetota
CCA
Trp
>WENV181176766
OEJR01038356
150473
Actinomycetota
CTC
Glu
>WENV181176813
OEJR01050446
239204
Actinomycetota
CTT
Lys
>WENV181176749
OEJR01033470
148467
Actinomycetota
CAT
Met
>WENV181176893
OEJR01066686
246299
Actinomycetota
CTT
Lys
>WENV181176807
OEJR01048843
42714
Actinomycetota
GAG
Leu
>WENV181176887
OEJR01064384
162402
Actinomycetota
GGG
Pro
>WENV181176544
OEJR01011037
293092
Actinomycetota
CTC
Glu
>WENV181177020
OEJR01127300
246365
Actinomycetota
ACG
Arg
>WENV181177051
OEJR01144845
412870
Actinomycetota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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