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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181212658
OFBT01000010
412586
Actinomycetota
CCC
Gly
>WENV181212659
OFBT01000011
235606
Actinomycetota
GGT
Thr
>WENV181212660
OFBT01000011
338474
Actinomycetota
CAT
Met
>WENV181212664
OFBT01000026
235384
Actinomycetota
GTG
His
>WENV181212665
OFBT01000026
235609
Actinomycetota
CTT
Lys
>WENV181212666
OFBT01000044
235605
Actinomycetota
CGT
Thr
>WENV181212667
OFBT01000055
338387
Actinomycetota
>WENV181212672
OFBT01000074
238649
Actinomycetota
TAC
Val
>WENV181212674
OFBT01000080
235663
Actinomycetota
TTT
Lys
>WENV181212675
OFBT01000080
235574
Actinomycetota
TTC
Glu
>WENV181212678
OFBT01000080
238648
Actinomycetota
GAA
Phe
>WENV181212676
OFBT01000080
149270
Actinomycetota
GTC
Asp
>WENV181212679
OFBT01000088
96217
Actinomycetota
TAG
Leu
>WENV181212680
OFBT01000092
235615
Actinomycetota
TGC
Ala
>WENV181212682
OFBT01000108
182307
Actinomycetota
TCT
Arg
>WENV181212683
OFBT01000116
155156
Actinomycetota
CCG
Arg
>WENV181212684
OFBT01000145
243275
Actinomycetota
CCT
Arg
>WENV181212692
OFBT01000170
145084
Actinomycetota
GGG
Pro
>WENV181212695
OFBT01000218
363051
Actinomycetota
CTG
Gln
>WENV181212696
OFBT01000218
285954
Actinomycetota
>WENV181212698
OFBT01000230
3286
Actinomycetota
>WENV181212700
OFBT01000241
105097
Actinomycetota
GTA
Tyr
>WENV181212702
OFBT01000251
37831
Actinomycetota
GGA
Ser
>WENV181212706
OFBT01000414
16526
Actinomycetota
CGA
Ser
>WENV181212707
OFBT01000495
235604
Actinomycetota
CCT
Arg
>WENV181212708
OFBT01000500
155153
Actinomycetota
CAT
Met
>WENV181212709
OFBT01000510
145065
Actinomycetota
GAT
Ile
>WENV181212711
OFBT01000602
105097
Actinomycetota
GTA
Tyr
>WENV181212717
OFBT01000904
359306
Actinomycetota
TCC
Gly
>WENV181212718
OFBT01000920
239214
Actinomycetota
TTC
Glu
>WENV181212720
OFBT01000945
188241
Actinomycetota
CAT
Met
>WENV181212721
OFBT01000945
235655
Actinomycetota
GTT
Asn
>WENV181212722
OFBT01000950
363051
Actinomycetota
CTG
Gln
>WENV181212724
OFBT01001029
148463
Actinomycetota
TAA
Leu
>WENV181212725
OFBT01001132
176229
Actinomycetota
CAA
Leu
>WENV181212728
OFBT01001308
46608
Actinomycetota
TGA
Ser
>WENV181212729
OFBT01001492
95656
Actinomycetota
TAG
Leu
>WENV181212730
OFBT01001694
148476
Actinomycetota
GGG
Pro
>WENV181212731
OFBT01001875
37093
Actinomycetota
GAG
Leu
>WENV181212733
OFBT01001927
40197
Actinomycetota
GGA
Ser
>WENV181212734
OFBT01001998
235384
Actinomycetota
GTG
His
>WENV181212736
OFBT01002802
193208
Actinomycetota
CGG
Pro
>WENV181212738
OFBT01003340
235606
Actinomycetota
GGT
Thr
>WENV181212739
OFBT01003340
340329
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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