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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181493896
OGGB01000001
280499
Actinomycetota
CCT
Arg
>WENV181493895
OGGB01000001
237585
Actinomycetota
TAC
Val
>WENV181493903
OGGB01000003
140768
Actinomycetota
TAG
Leu
>WENV181493906
OGGB01000003
280450
Actinomycetota
TTT
Lys
>WENV181493900
OGGB01000003
280489
Actinomycetota
CTC
Glu
>WENV181493901
OGGB01000003
398853
Actinomycetota
CTG
Gln
>WENV181493902
OGGB01000003
280470
Actinomycetota
CGT
Thr
>WENV181493908
OGGB01000004
147806
Actinomycetota
TAA
Leu
>WENV181493907
OGGB01000004
175837
Actinomycetota
ACG
Arg
>WENV181493910
OGGB01000004
175882
Actinomycetota
TGG
Pro
>WENV181493909
OGGB01000004
176642
Actinomycetota
CAA
Leu
>WENV181493955
OGGB01000019
349003
Actinomycetota
CCG
Arg
>WENV181493965
OGGB01000023
176499
Actinomycetota
CAT
Met
>WENV181493966
OGGB01000023
56166
Actinomycetota
TGA
Ser
>WENV181493968
OGGB01000023
46642
Actinomycetota
CGA
Ser
>WENV181493964
OGGB01000023
117903
Actinomycetota
GTA
Tyr
>WENV181493996
OGGB01000040
280524
Actinomycetota
TGC
Ala
>WENV181493997
OGGB01000040
280523
Actinomycetota
GGC
Ala
>WENV181493999
OGGB01000040
480329
Actinomycetota
CCC
Gly
>WENV181493994
OGGB01000040
104211
Actinomycetota
CAG
Leu
>WENV181494020
OGGB01000059
176638
Actinomycetota
GGG
Pro
>WENV181494094
OGGB01000145
176555
Actinomycetota
CAT
Met
>WENV181494144
OGGB01000289
280498
Actinomycetota
GTT
Asn
>WENV181494143
OGGB01000289
280523
Actinomycetota
GGC
Ala
>WENV181494205
OGGB01000429
176723
Actinomycetota
TCT
Arg
>WENV181494491
OGGB01002142
480319
Actinomycetota
TTG
Gln
>WENV181494908
OGGB01019226
124580
Actinomycetota
GTA
Tyr
>WENV181495058
OGGB01054537
284890
Actinomycetota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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