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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181589639
OGKM01000003
198659
Actinomycetota
TAC
Val
>WENV181589640
OGKM01000003
235149
Actinomycetota
CCT
Arg
>WENV181589641
OGKM01000004
16467
Actinomycetota
GCT
Ser
>WENV181589643
OGKM01000004
338148
Actinomycetota
CTG
Gln
>WENV181589644
OGKM01000004
235121
Actinomycetota
CGT
Thr
>WENV181589645
OGKM01000004
113601
Actinomycetota
TAG
Leu
>WENV181589648
OGKM01000004
98279
Actinomycetota
GTA
Tyr
>WENV181589679
OGKM01000014
144825
Actinomycetota
CAT
Met
>WENV181589680
OGKM01000014
235348
Actinomycetota
CCT
Arg
>WENV181589695
OGKM01000027
254857
Actinomycetota
CCG
Arg
>WENV181589705
OGKM01000038
235148
Actinomycetota
GTT
Asn
>WENV181589706
OGKM01000038
235148
Actinomycetota
GTT
Asn
>WENV181589707
OGKM01000038
235173
Actinomycetota
GGC
Ala
>WENV181589708
OGKM01000038
235148
Actinomycetota
GTT
Asn
>WENV181589715
OGKM01000043
145343
Actinomycetota
GGG
Pro
>WENV181589725
OGKM01000051
144589
Actinomycetota
ACG
Arg
>WENV181589726
OGKM01000051
144589
Actinomycetota
ACG
Arg
>WENV181589728
OGKM01000053
17009
Actinomycetota
GAG
Leu
>WENV181589735
OGKM01000072
145269
Actinomycetota
CAT
Met
>WENV181589736
OGKM01000073
235101
Actinomycetota
TTT
Lys
>WENV181589738
OGKM01000074
201717
Actinomycetota
CTT
Lys
>WENV181589739
OGKM01000074
53078
Actinomycetota
GGA
Ser
>WENV181589741
OGKM01000079
243671
Actinomycetota
CTC
Glu
>WENV181589742
OGKM01000079
356597
Actinomycetota
CTG
Gln
>WENV181589744
OGKM01000081
119485
Actinomycetota
TAA
Leu
>WENV181589749
OGKM01000084
176456
Actinomycetota
TCT
Arg
>WENV181589759
OGKM01000094
144823
Actinomycetota
TCT
Arg
>WENV181589760
OGKM01000094
278447
Actinomycetota
GTG
His
>WENV181589763
OGKM01000095
235174
Actinomycetota
TGC
Ala
>WENV181589764
OGKM01000095
235173
Actinomycetota
GGC
Ala
>WENV181589772
OGKM01000107
37070
Actinomycetota
CGA
Ser
>WENV181589773
OGKM01000107
44942
Actinomycetota
TGA
Ser
>WENV181589776
OGKM01000120
235199
Actinomycetota
CAC
Val
>WENV181589777
OGKM01000120
273786
Actinomycetota
CGT
Thr
>WENV181589778
OGKM01000120
113601
Actinomycetota
TAG
Leu
>WENV181589779
OGKM01000120
235146
Actinomycetota
CGT
Thr
>WENV181589791
OGKM01000149
411601
Actinomycetota
CCC
Gly
>WENV181589792
OGKM01000149
80622
Actinomycetota
CAG
Leu
>WENV181589801
OGKM01000181
411554
Actinomycetota
CCC
Gly
>WENV181589802
OGKM01000181
80622
Actinomycetota
CAG
Leu
>WENV181589810
OGKM01000205
338239
Actinomycetota
TTC
Glu
>WENV181589812
OGKM01000205
44855
Actinomycetota
TGA
Ser
>WENV181589813
OGKM01000206
144600
Actinomycetota
TGG
Pro
>WENV181589838
OGKM01000255
95593
Actinomycetota
>WENV181589839
OGKM01000255
144700
Actinomycetota
CAT
Met
>WENV181589840
OGKM01000255
23370
Actinomycetota
GCT
Ser
>WENV181589846
OGKM01000266
121510
Actinomycetota
TAA
Leu
>WENV181589855
OGKM01000272
174149
Actinomycetota
GAT
Ile
>WENV181589856
OGKM01000272
235174
Actinomycetota
TGC
Ala
>WENV181589891
OGKM01000386
144635
Actinomycetota
TGG
Pro
>WENV181589952
OGKM01000752
144595
Actinomycetota
CAA
Leu
>WENV181589953
OGKM01000761
145347
Actinomycetota
CAA
Leu
>WENV181589971
OGKM01001027
243162
Actinomycetota
GTT
Asn
>WENV181589982
OGKM01001086
243162
Actinomycetota
GTT
Asn
>WENV181590002
OGKM01001391
44862
Actinomycetota
CGA
Ser
>WENV181590030
OGKM01001948
235347
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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