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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181700846
OGPH01000032
179231
Actinomycetota
TAC
Val
>WENV181700898
OGPH01000064
140768
Actinomycetota
TAG
Leu
>WENV181700896
OGPH01000064
398853
Actinomycetota
CTG
Gln
>WENV181700897
OGPH01000064
280470
Actinomycetota
CGT
Thr
>WENV181700901
OGPH01000067
317680
Actinomycetota
CCG
Arg
>WENV181700922
OGPH01000071
398948
Actinomycetota
TTC
Glu
>WENV181700920
OGPH01000071
56166
Actinomycetota
TGA
Ser
>WENV181700924
OGPH01000071
46642
Actinomycetota
CGA
Ser
>WENV181700963
OGPH01000116
295964
Actinomycetota
GTT
Asn
>WENV181700981
OGPH01000137
176555
Actinomycetota
CAT
Met
>WENV181700982
OGPH01000137
203883
Actinomycetota
TCT
Arg
>WENV181701008
OGPH01000154
176499
Actinomycetota
CAT
Met
>WENV181701007
OGPH01000154
117903
Actinomycetota
GTA
Tyr
>WENV181701047
OGPH01000197
280524
Actinomycetota
TGC
Ala
>WENV181701048
OGPH01000197
280523
Actinomycetota
GGC
Ala
>WENV181701045
OGPH01000197
104211
Actinomycetota
CAG
Leu
>WENV181701054
OGPH01000215
280498
Actinomycetota
GTT
Asn
>WENV181701055
OGPH01000215
280498
Actinomycetota
GTT
Asn
>WENV181701057
OGPH01000215
280498
Actinomycetota
GTT
Asn
>WENV181701056
OGPH01000215
280523
Actinomycetota
GGC
Ala
>WENV181701062
OGPH01000220
175843
Actinomycetota
CAA
Leu
>WENV181701067
OGPH01000229
175882
Actinomycetota
TGG
Pro
>WENV181701066
OGPH01000229
176642
Actinomycetota
CAA
Leu
>WENV181701068
OGPH01000230
175837
Actinomycetota
ACG
Arg
>WENV181701074
OGPH01000241
280498
Actinomycetota
GTT
Asn
>WENV181701073
OGPH01000241
295964
Actinomycetota
GTT
Asn
>WENV181701099
OGPH01000273
176638
Actinomycetota
GGG
Pro
>WENV181701104
OGPH01000279
480319
Actinomycetota
TTG
Gln
>WENV181701108
OGPH01000298
191955
Actinomycetota
TGT
Thr
>WENV181701110
OGPH01000300
178569
Actinomycetota
CAT
Met
>WENV181701131
OGPH01000333
176077
Actinomycetota
CAT
Met
>WENV181701136
OGPH01000348
222475
Actinomycetota
CTT
Lys
>WENV181701223
OGPH01000536
280703
Actinomycetota
CCT
Arg
>WENV181701240
OGPH01000599
29393
Actinomycetota
GCT
Ser
>WENV181701238
OGPH01000599
117777
Actinomycetota
>WENV181701239
OGPH01000599
175949
Actinomycetota
CAT
Met
>WENV181701242
OGPH01000605
280544
Actinomycetota
GTG
His
>WENV181701245
OGPH01000610
56083
Actinomycetota
CGA
Ser
>WENV181701247
OGPH01000624
175837
Actinomycetota
ACG
Arg
>WENV181701259
OGPH01000651
175907
Actinomycetota
TAC
Val
>WENV181701266
OGPH01000668
222475
Actinomycetota
CTT
Lys
>WENV181701277
OGPH01000706
56383
Actinomycetota
CGA
Ser
>WENV181701278
OGPH01000707
150272
Actinomycetota
TAA
Leu
>WENV181701283
OGPH01000728
56075
Actinomycetota
TGA
Ser
>WENV181701304
OGPH01000792
283313
Actinomycetota
CCG
Arg
>WENV181701313
OGPH01000811
280549
Actinomycetota
CAC
Val
>WENV181701312
OGPH01000811
434162
Actinomycetota
GAC
Val
>WENV181701330
OGPH01000847
480374
Actinomycetota
TTG
Gln
>WENV181701347
OGPH01000902
20205
Actinomycetota
GCT
Ser
>WENV181701352
OGPH01000917
283311
Actinomycetota
CCT
Arg
>WENV181701356
OGPH01000942
147806
Actinomycetota
TAA
Leu
>WENV181701358
OGPH01000954
20415
Actinomycetota
GAG
Leu
>WENV181701360
OGPH01000970
482604
Actinomycetota
TTG
Gln
>WENV181701361
OGPH01000970
280702
Actinomycetota
GGC
Ala
>WENV181701362
OGPH01000972
176075
Actinomycetota
TCT
Arg
>WENV181701397
OGPH01001013
398853
Actinomycetota
CTG
Gln
>WENV181701396
OGPH01001013
289788
Actinomycetota
CTC
Glu
>WENV181701398
OGPH01001014
56384
Actinomycetota
TGA
Ser
>WENV181701405
OGPH01001027
176078
Actinomycetota
GGG
Pro
>WENV181701419
OGPH01001100
280524
Actinomycetota
TGC
Ala
>WENV181701418
OGPH01001100
179238
Actinomycetota
GAT
Ile
>WENV181701424
OGPH01001106
280524
Actinomycetota
TGC
Ala
>WENV181701445
OGPH01001191
140768
Actinomycetota
TAG
Leu
>WENV181701446
OGPH01001191
280496
Actinomycetota
CGT
Thr
>WENV181701444
OGPH01001191
323758
Actinomycetota
CGT
Thr
>WENV181701489
OGPH01001529
480329
Actinomycetota
CCC
Gly
>WENV181701512
OGPH01001674
227544
Actinomycetota
TAC
Val
>WENV181701532
OGPH01001793
482604
Actinomycetota
TTG
Gln
>WENV181701531
OGPH01001793
280523
Actinomycetota
GGC
Ala
>WENV181701554
OGPH01001962
140878
Actinomycetota
TAA
Leu
>WENV181701556
OGPH01001965
140879
Actinomycetota
TAG
Leu
>WENV181701555
OGPH01001965
280470
Actinomycetota
CGT
Thr
>WENV181701563
OGPH01002071
480376
Actinomycetota
CCC
Gly
>WENV181701568
OGPH01002102
280499
Actinomycetota
CCT
Arg
>WENV181701573
OGPH01002161
283312
Actinomycetota
GTG
His
>WENV181701619
OGPH01002703
398948
Actinomycetota
TTC
Glu
>WENV181701632
OGPH01002786
175843
Actinomycetota
CAA
Leu
>WENV181701636
OGPH01002813
317680
Actinomycetota
CCG
Arg
>WENV181701699
OGPH01003719
280450
Actinomycetota
TTT
Lys
>WENV181701776
OGPH01005446
316729
Actinomycetota
CAC
Val
>WENV181701940
OGPH01009713
20208
Actinomycetota
GAG
Leu
>WENV181702283
OGPH01043681
147829
Actinomycetota
TAA
Leu
>WENV181702390
OGPH01073163
14009
Actinomycetota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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