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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181734599
OGQF01003393
235146
Actinomycetota
CGT
Thr
>WENV181734793
OGQF01008870
119475
Actinomycetota
TAA
Leu
>WENV181734762
OGQF01007482
235347
Actinomycetota
GGC
Ala
>WENV181734546
OGQF01002760
166493
Actinomycetota
CTT
Lys
>WENV181734763
OGQF01007506
144600
Actinomycetota
TGG
Pro
>WENV181734694
OGQF01005594
235194
Actinomycetota
GTG
His
>WENV181734597
OGQF01003393
273786
Actinomycetota
CGT
Thr
>WENV181734874
OGQF01011486
158720
Actinomycetota
ACG
Arg
>WENV181734675
OGQF01004749
245301
Actinomycetota
GCC
Gly
>WENV181734972
OGQF01024188
411601
Actinomycetota
CCC
Gly
>WENV181734761
OGQF01007460
23370
Actinomycetota
GCT
Ser
>WENV181734827
OGQF01009962
174149
Actinomycetota
GAT
Ile
>WENV181734828
OGQF01009962
235174
Actinomycetota
TGC
Ala
>WENV181734821
OGQF01009626
235101
Actinomycetota
TTT
Lys
>WENV181734483
OGQF01002137
121510
Actinomycetota
TAA
Leu
>WENV181734611
OGQF01003557
356045
Actinomycetota
GAC
Val
>WENV181734917
OGQF01016611
153948
Actinomycetota
GGG
Pro
>WENV181734582
OGQF01003181
44855
Actinomycetota
TGA
Ser
>WENV181734612
OGQF01003557
235199
Actinomycetota
CAC
Val
>WENV181734690
OGQF01005340
44862
Actinomycetota
CGA
Ser
>WENV181734525
OGQF01002492
413665
Actinomycetota
TTG
Gln
>WENV181734885
OGQF01012352
254857
Actinomycetota
CCG
Arg
>WENV181734977
OGQF01024739
144593
Actinomycetota
TAT
Ile
>WENV181734799
OGQF01009026
144700
Actinomycetota
CAT
Met
>WENV181734579
OGQF01003114
144636
Actinomycetota
GAT
Ile
>WENV181734856
OGQF01010705
295695
Actinomycetota
CTC
Glu
>WENV181734869
OGQF01011096
98279
Actinomycetota
GTA
Tyr
>WENV181734857
OGQF01010705
338148
Actinomycetota
CTG
Gln
>WENV181734665
OGQF01004521
235148
Actinomycetota
GTT
Asn
>WENV181734695
OGQF01005637
53078
Actinomycetota
GGA
Ser
>WENV181734946
OGQF01021007
176456
Actinomycetota
TCT
Arg
>WENV181734782
OGQF01008051
144825
Actinomycetota
CAT
Met
>WENV181734784
OGQF01008163
338139
Actinomycetota
GTT
Asn
>WENV181734619
OGQF01003677
235348
Actinomycetota
CCT
Arg
>WENV181734598
OGQF01003393
113601
Actinomycetota
TAG
Leu
>WENV181734780
OGQF01007959
144595
Actinomycetota
CAA
Leu
>WENV181734427
OGQF01001587
414234
Actinomycetota
CTG
Gln
>WENV181734589
OGQF01003269
61501
Actinomycetota
CAG
Leu
>WENV181734879
OGQF01012066
80622
Actinomycetota
CAG
Leu
>WENV181734429
OGQF01001593
158513
Actinomycetota
TGG
Pro
>WENV181734842
OGQF01010372
243162
Actinomycetota
GTT
Asn
>WENV181734755
OGQF01007224
144660
Actinomycetota
TAC
Val
>WENV181734798
OGQF01009026
95593
Actinomycetota
>WENV181734581
OGQF01003118
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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