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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181868342
OGWX01000054
179231
Actinomycetota
TAC
Val
>WENV181868468
OGWX01000302
176499
Actinomycetota
CAT
Met
>WENV181868473
OGWX01000327
175907
Actinomycetota
TAC
Val
>WENV181869277
OGWX01019428
285746
Actinomycetota
GGC
Ala
>WENV181868286
OGWX01000008
280498
Actinomycetota
GTT
Asn
>WENV181868428
OGWX01000198
280498
Actinomycetota
GTT
Asn
>WENV181868429
OGWX01000198
280498
Actinomycetota
GTT
Asn
>WENV181868699
OGWX01001396
280503
Actinomycetota
CCT
Arg
>WENV181868796
OGWX01002281
295964
Actinomycetota
GTT
Asn
>WENV181868759
OGWX01001868
56083
Actinomycetota
CGA
Ser
>WENV181868426
OGWX01000194
140768
Actinomycetota
TAG
Leu
>WENV181868630
OGWX01001056
140768
Actinomycetota
TAG
Leu
>WENV181868472
OGWX01000326
176075
Actinomycetota
TCT
Arg
>WENV181869288
OGWX01021313
175848
Actinomycetota
TGG
Pro
>WENV181868454
OGWX01000257
176078
Actinomycetota
GGG
Pro
>WENV181868748
OGWX01001725
482604
Actinomycetota
TTG
Gln
>WENV181868470
OGWX01000313
175837
Actinomycetota
ACG
Arg
>WENV181868557
OGWX01000712
175837
Actinomycetota
ACG
Arg
>WENV181868383
OGWX01000127
29393
Actinomycetota
GCT
Ser
>WENV181868693
OGWX01001363
280549
Actinomycetota
CAC
Val
>WENV181868833
OGWX01002841
280441
Actinomycetota
CCG
Arg
>WENV181868749
OGWX01001725
280702
Actinomycetota
GGC
Ala
>WENV181868737
OGWX01001659
398843
Actinomycetota
GTT
Asn
>WENV181868601
OGWX01000928
176077
Actinomycetota
CAT
Met
>WENV181868718
OGWX01001542
298224
Actinomycetota
GGC
Ala
>WENV181868459
OGWX01000260
176638
Actinomycetota
GGG
Pro
>WENV181869344
OGWX01028815
484283
Actinomycetota
CTG
Gln
>WENV181868727
OGWX01001601
280524
Actinomycetota
TGC
Ala
>WENV181868884
OGWX01003550
481719
Actinomycetota
GCA
Cys
>WENV181868922
OGWX01004107
398948
Actinomycetota
TTC
Glu
>WENV181868883
OGWX01003550
291585
Actinomycetota
GCC
Gly
>WENV181868281
OGWX01000007
150272
Actinomycetota
TAA
Leu
>WENV181868381
OGWX01000127
117777
Actinomycetota
>WENV181868285
OGWX01000008
280523
Actinomycetota
GGC
Ala
>WENV181868382
OGWX01000127
175949
Actinomycetota
CAT
Met
>WENV181869328
OGWX01026588
176555
Actinomycetota
CAT
Met
>WENV181868576
OGWX01000786
191955
Actinomycetota
TGT
Thr
>WENV181868351
OGWX01000079
175841
Actinomycetota
TAT
Ile
>WENV181868822
OGWX01002639
280544
Actinomycetota
GTG
His
>WENV181868931
OGWX01004229
280536
Actinomycetota
CTT
Lys
>WENV181868427
OGWX01000194
280496
Actinomycetota
CGT
Thr
>WENV181868921
OGWX01004107
175872
Actinomycetota
GTC
Asp
>WENV181868384
OGWX01000130
280703
Actinomycetota
CCT
Arg
>WENV181868337
OGWX01000050
280450
Actinomycetota
TTT
Lys
>WENV181868979
OGWX01005205
280450
Actinomycetota
TTT
Lys
>WENV181868425
OGWX01000194
323758
Actinomycetota
CGT
Thr
>WENV181868964
OGWX01004840
480329
Actinomycetota
CCC
Gly
>WENV181868434
OGWX01000209
483206
Actinomycetota
CTG
Gln
>WENV181868283
OGWX01000007
175882
Actinomycetota
TGG
Pro
>WENV181868552
OGWX01000681
99865
Actinomycetota
CAG
Leu
>WENV181868338
OGWX01000050
222475
Actinomycetota
CTT
Lys
>WENV181869435
OGWX01050877
283352
Actinomycetota
GCC
Gly
>WENV181868284
OGWX01000008
480319
Actinomycetota
TTG
Gln
>WENV181869072
OGWX01007045
280489
Actinomycetota
CTC
Glu
>WENV181869100
OGWX01007834
280499
Actinomycetota
CCT
Arg
>WENV181868895
OGWX01003632
297606
Actinomycetota
CCT
Arg
>WENV181868486
OGWX01000371
398853
Actinomycetota
CTG
Gln
>WENV181869073
OGWX01007045
398853
Actinomycetota
CTG
Gln
>WENV181868516
OGWX01000470
176642
Actinomycetota
CAA
Leu
>WENV181868282
OGWX01000007
175843
Actinomycetota
CAA
Leu
>WENV181868484
OGWX01000370
203883
Actinomycetota
TCT
Arg
>WENV181868352
OGWX01000082
56075
Actinomycetota
TGA
Ser
>WENV181868857
OGWX01003142
46642
Actinomycetota
CGA
Ser
>WENV181868461
OGWX01000268
104211
Actinomycetota
CAG
Leu
>WENV181869159
OGWX01010364
104211
Actinomycetota
CAG
Leu
>WENV181868754
OGWX01001771
317680
Actinomycetota
CCG
Arg
>WENV181868467
OGWX01000302
117903
Actinomycetota
GTA
Tyr
>WENV181868525
OGWX01000485
56071
Actinomycetota
TGA
Ser
>WENV181868372
OGWX01000103
147796
Actinomycetota
TAA
Leu
>WENV181868629
OGWX01001056
280470
Actinomycetota
CGT
Thr
>WENV181869128
OGWX01009028
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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