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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181872303
OGWZ01002090
117777
Actinomycetota
>WENV181871554
OGWZ01000270
152047
Actinomycetota
ACG
Arg
>WENV181871934
OGWZ01000892
175837
Actinomycetota
ACG
Arg
>WENV181871935
OGWZ01000892
175837
Actinomycetota
ACG
Arg
>WENV181872407
OGWZ01002612
175837
Actinomycetota
ACG
Arg
>WENV181872408
OGWZ01002612
175837
Actinomycetota
ACG
Arg
>WENV181873269
OGWZ01052530
176642
Actinomycetota
CAA
Leu
>WENV181871737
OGWZ01000497
175843
Actinomycetota
CAA
Leu
>WENV181872568
OGWZ01003710
175843
Actinomycetota
CAA
Leu
>WENV181871421
OGWZ01000157
280549
Actinomycetota
CAC
Val
>WENV181873012
OGWZ01015101
99865
Actinomycetota
CAG
Leu
>WENV181872952
OGWZ01012835
104211
Actinomycetota
CAG
Leu
>WENV181872358
OGWZ01002349
176499
Actinomycetota
CAT
Met
>WENV181871542
OGWZ01000258
176077
Actinomycetota
CAT
Met
>WENV181872184
OGWZ01001561
175949
Actinomycetota
CAT
Met
>WENV181873253
OGWZ01048790
176555
Actinomycetota
CAT
Met
>WENV181872542
OGWZ01003515
175926
Actinomycetota
CAT
Met
>WENV181872313
OGWZ01002142
480329
Actinomycetota
CCC
Gly
>WENV181872538
OGWZ01003428
480329
Actinomycetota
CCC
Gly
>WENV181872545
OGWZ01003554
480376
Actinomycetota
CCC
Gly
>WENV181872714
OGWZ01005741
280441
Actinomycetota
CCG
Arg
>WENV181872548
OGWZ01003581
317680
Actinomycetota
CCG
Arg
>WENV181871994
OGWZ01001030
280503
Actinomycetota
CCT
Arg
>WENV181872304
OGWZ01002113
280703
Actinomycetota
CCT
Arg
>WENV181872703
OGWZ01005450
280499
Actinomycetota
CCT
Arg
>WENV181872321
OGWZ01002230
56083
Actinomycetota
CGA
Ser
>WENV181872295
OGWZ01002073
46642
Actinomycetota
CGA
Ser
>WENV181871420
OGWZ01000157
280496
Actinomycetota
CGT
Thr
>WENV181871418
OGWZ01000157
323758
Actinomycetota
CGT
Thr
>WENV181872535
OGWZ01003415
280470
Actinomycetota
CGT
Thr
>WENV181872401
OGWZ01002574
280489
Actinomycetota
CTC
Glu
>WENV181871342
OGWZ01000087
483206
Actinomycetota
CTG
Gln
>WENV181872153
OGWZ01001418
398853
Actinomycetota
CTG
Gln
>WENV181872402
OGWZ01002574
398853
Actinomycetota
CTG
Gln
>WENV181872354
OGWZ01002333
280536
Actinomycetota
CTT
Lys
>WENV181872355
OGWZ01002333
280536
Actinomycetota
CTT
Lys
>WENV181871493
OGWZ01000212
222475
Actinomycetota
CTT
Lys
>WENV181871761
OGWZ01000529
20208
Actinomycetota
GAG
Leu
>WENV181871483
OGWZ01000204
20209
Actinomycetota
GAG
Leu
>WENV181872835
OGWZ01008731
175883
Actinomycetota
GAT
Ile
>WENV181872837
OGWZ01008731
175883
Actinomycetota
GAT
Ile
>WENV181871983
OGWZ01000978
179238
Actinomycetota
GAT
Ile
>WENV181871318
OGWZ01000074
481719
Actinomycetota
GCA
Cys
>WENV181871317
OGWZ01000074
291585
Actinomycetota
GCC
Gly
>WENV181871319
OGWZ01000074
291585
Actinomycetota
GCC
Gly
>WENV181871320
OGWZ01000074
291585
Actinomycetota
GCC
Gly
>WENV181872185
OGWZ01001561
29393
Actinomycetota
GCT
Ser
>WENV181872738
OGWZ01006178
20205
Actinomycetota
GCT
Ser
>WENV181873026
OGWZ01015936
14009
Actinomycetota
GGA
Ser
>WENV181872070
OGWZ01001170
59689
Actinomycetota
GGA
Ser
>WENV181872433
OGWZ01002821
280702
Actinomycetota
GGC
Ala
>WENV181872434
OGWZ01002821
280702
Actinomycetota
GGC
Ala
>WENV181872275
OGWZ01001958
280523
Actinomycetota
GGC
Ala
>WENV181872188
OGWZ01001570
176078
Actinomycetota
GGG
Pro
>WENV181873203
OGWZ01037428
180826
Actinomycetota
GGG
Pro
>WENV181871605
OGWZ01000315
176638
Actinomycetota
GGG
Pro
>WENV181872357
OGWZ01002349
117903
Actinomycetota
GTA
Tyr
>WENV181873025
OGWZ01015902
175872
Actinomycetota
GTC
Asp
>WENV181873112
OGWZ01023868
175872
Actinomycetota
GTC
Asp
>WENV181872555
OGWZ01003653
280544
Actinomycetota
GTG
His
>WENV181872000
OGWZ01001044
280498
Actinomycetota
GTT
Asn
>WENV181872001
OGWZ01001044
280498
Actinomycetota
GTT
Asn
>WENV181872466
OGWZ01003045
280498
Actinomycetota
GTT
Asn
>WENV181872327
OGWZ01002244
295964
Actinomycetota
GTT
Asn
>WENV181872691
OGWZ01005208
295964
Actinomycetota
GTT
Asn
>WENV181871501
OGWZ01000216
398843
Actinomycetota
GTT
Asn
>WENV181871502
OGWZ01000216
398843
Actinomycetota
GTT
Asn
>WENV181871815
OGWZ01000624
150272
Actinomycetota
TAA
Leu
>WENV181871831
OGWZ01000654
147796
Actinomycetota
TAA
Leu
>WENV181872430
OGWZ01002786
179231
Actinomycetota
TAC
Val
>WENV181871891
OGWZ01000775
175907
Actinomycetota
TAC
Val
>WENV181871419
OGWZ01000157
140768
Actinomycetota
TAG
Leu
>WENV181872536
OGWZ01003415
140768
Actinomycetota
TAG
Leu
>WENV181872333
OGWZ01002271
175841
Actinomycetota
TAT
Ile
>WENV181872115
OGWZ01001255
176075
Actinomycetota
TCT
Arg
>WENV181872496
OGWZ01003208
203883
Actinomycetota
TCT
Arg
>WENV181872425
OGWZ01002713
56075
Actinomycetota
TGA
Ser
>WENV181872636
OGWZ01004428
56071
Actinomycetota
TGA
Ser
>WENV181871984
OGWZ01000978
280524
Actinomycetota
TGC
Ala
>WENV181872400
OGWZ01002555
175848
Actinomycetota
TGG
Pro
>WENV181871738
OGWZ01000497
175882
Actinomycetota
TGG
Pro
>WENV181872146
OGWZ01001409
191955
Actinomycetota
TGT
Thr
>WENV181872432
OGWZ01002821
482604
Actinomycetota
TTG
Gln
>WENV181871558
OGWZ01000270
480374
Actinomycetota
TTG
Gln
>WENV181872276
OGWZ01001958
480319
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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