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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181928209
OGYO01000081
98279
Actinomycetota
GTA
Tyr
>WENV181928221
OGYO01000111
61501
Actinomycetota
CAG
Leu
>WENV181928250
OGYO01000216
145343
Actinomycetota
GGG
Pro
>WENV181928251
OGYO01000217
47164
Actinomycetota
GGA
Ser
>WENV181928267
OGYO01000249
235149
Actinomycetota
CCT
Arg
>WENV181928276
OGYO01000278
338148
Actinomycetota
CTG
Gln
>WENV181928355
OGYO01000540
16219
Actinomycetota
GCT
Ser
>WENV181928367
OGYO01000589
37070
Actinomycetota
CGA
Ser
>WENV181928379
OGYO01000641
414234
Actinomycetota
CTG
Gln
>WENV181928444
OGYO01001044
16223
Actinomycetota
GAG
Leu
>WENV181928489
OGYO01001258
198659
Actinomycetota
TAC
Val
>WENV181928497
OGYO01001307
235173
Actinomycetota
GGC
Ala
>WENV181928517
OGYO01001431
119475
Actinomycetota
TAA
Leu
>WENV181928549
OGYO01001627
338139
Actinomycetota
GTT
Asn
>WENV181928575
OGYO01001845
44942
Actinomycetota
TGA
Ser
>WENV181928703
OGYO01003072
176456
Actinomycetota
TCT
Arg
>WENV181928714
OGYO01003218
235148
Actinomycetota
GTT
Asn
>WENV181928724
OGYO01003347
411554
Actinomycetota
CCC
Gly
>WENV181928757
OGYO01003833
158513
Actinomycetota
TGG
Pro
>WENV181928766
OGYO01003965
113601
Actinomycetota
TAG
Leu
>WENV181928765
OGYO01003965
235121
Actinomycetota
CGT
Thr
>WENV181928834
OGYO01004960
144593
Actinomycetota
TAT
Ile
>WENV181928880
OGYO01005550
153948
Actinomycetota
GGG
Pro
>WENV181928945
OGYO01006640
245301
Actinomycetota
GCC
Gly
>WENV181928946
OGYO01006640
412834
Actinomycetota
GCA
Cys
>WENV181928954
OGYO01006797
144595
Actinomycetota
CAA
Leu
>WENV181928987
OGYO01007242
144625
Actinomycetota
GTC
Asp
>WENV181929000
OGYO01007437
235153
Actinomycetota
CCT
Arg
>WENV181929014
OGYO01007905
144635
Actinomycetota
TGG
Pro
>WENV181929017
OGYO01007959
235092
Actinomycetota
CCG
Arg
>WENV181929107
OGYO01010804
278447
Actinomycetota
GTG
His
>WENV181929248
OGYO01015177
144589
Actinomycetota
ACG
Arg
>WENV181929250
OGYO01015250
240009
Actinomycetota
GGC
Ala
>WENV181929422
OGYO01023440
235174
Actinomycetota
TGC
Ala
>WENV181929431
OGYO01023910
235101
Actinomycetota
TTT
Lys
>WENV181929751
OGYO01063884
144825
Actinomycetota
CAT
Met
>WENV181929865
OGYO01100654
144823
Actinomycetota
TCT
Arg
>WENV181929886
OGYO01108990
44855
Actinomycetota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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