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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181939516
OGYX01002108
175837
Actinomycetota
ACG
Arg
>WENV181939517
OGYX01002108
175837
Actinomycetota
ACG
Arg
>WENV181939413
OGYX01001394
176642
Actinomycetota
CAA
Leu
>WENV181940050
OGYX01014551
175843
Actinomycetota
CAA
Leu
>WENV181939963
OGYX01010391
104211
Actinomycetota
CAG
Leu
>WENV181940516
OGYX01099351
176499
Actinomycetota
CAT
Met
>WENV181939967
OGYX01010800
176555
Actinomycetota
CAT
Met
>WENV181939304
OGYX01000952
175926
Actinomycetota
CAT
Met
>WENV181939555
OGYX01002414
480329
Actinomycetota
CCC
Gly
>WENV181939995
OGYX01011644
480329
Actinomycetota
CCC
Gly
>WENV181939184
OGYX01000515
280503
Actinomycetota
CCT
Arg
>WENV181940401
OGYX01058836
280703
Actinomycetota
CCT
Arg
>WENV181939288
OGYX01000872
280499
Actinomycetota
CCT
Arg
>WENV181939266
OGYX01000781
46642
Actinomycetota
CGA
Ser
>WENV181939944
OGYX01009899
46642
Actinomycetota
CGA
Ser
>WENV181939531
OGYX01002230
280470
Actinomycetota
CGT
Thr
>WENV181939489
OGYX01001911
241064
Actinomycetota
CTC
Glu
>WENV181939514
OGYX01002097
241064
Actinomycetota
CTC
Glu
>WENV181939515
OGYX01002097
241064
Actinomycetota
CTC
Glu
>WENV181939105
OGYX01000277
280489
Actinomycetota
CTC
Glu
>WENV181939488
OGYX01001911
483206
Actinomycetota
CTG
Gln
>WENV181939106
OGYX01000277
398853
Actinomycetota
CTG
Gln
>WENV181939739
OGYX01004716
280536
Actinomycetota
CTT
Lys
>WENV181939740
OGYX01004716
280536
Actinomycetota
CTT
Lys
>WENV181940450
OGYX01074832
447337
Actinomycetota
GAC
Val
>WENV181940280
OGYX01035686
21508
Actinomycetota
GAG
Leu
>WENV181940173
OGYX01023110
20415
Actinomycetota
GAG
Leu
>WENV181939448
OGYX01001627
20209
Actinomycetota
GAG
Leu
>WENV181939190
OGYX01000544
175883
Actinomycetota
GAT
Ile
>WENV181939791
OGYX01005582
291585
Actinomycetota
GCC
Gly
>WENV181939669
OGYX01003735
20205
Actinomycetota
GCT
Ser
>WENV181940247
OGYX01031923
59689
Actinomycetota
GGA
Ser
>WENV181939801
OGYX01005793
280523
Actinomycetota
GGC
Ala
>WENV181939844
OGYX01006848
280523
Actinomycetota
GGC
Ala
>WENV181939427
OGYX01001460
176638
Actinomycetota
GGG
Pro
>WENV181940515
OGYX01099351
117903
Actinomycetota
GTA
Tyr
>WENV181940423
OGYX01064904
283312
Actinomycetota
GTG
His
>WENV181939256
OGYX01000757
280498
Actinomycetota
GTT
Asn
>WENV181939608
OGYX01002878
280498
Actinomycetota
GTT
Asn
>WENV181939711
OGYX01004240
280498
Actinomycetota
GTT
Asn
>WENV181939160
OGYX01000434
398843
Actinomycetota
GTT
Asn
>WENV181939687
OGYX01003906
147806
Actinomycetota
TAA
Leu
>WENV181939692
OGYX01003956
147796
Actinomycetota
TAA
Leu
>WENV181939020
OGYX01000101
237585
Actinomycetota
TAC
Val
>WENV181939907
OGYX01008659
237585
Actinomycetota
TAC
Val
>WENV181939532
OGYX01002230
140768
Actinomycetota
TAG
Leu
>WENV181939169
OGYX01000463
175841
Actinomycetota
TAT
Ile
>WENV181940491
OGYX01092544
176075
Actinomycetota
TCT
Arg
>WENV181939748
OGYX01004905
176723
Actinomycetota
TCT
Arg
>WENV181939599
OGYX01002779
203883
Actinomycetota
TCT
Arg
>WENV181940390
OGYX01055407
56384
Actinomycetota
TGA
Ser
>WENV181939141
OGYX01000371
56166
Actinomycetota
TGA
Ser
>WENV181939625
OGYX01003121
56071
Actinomycetota
TGA
Ser
>WENV181939800
OGYX01005793
280524
Actinomycetota
TGC
Ala
>WENV181939088
OGYX01000237
175882
Actinomycetota
TGG
Pro
>WENV181939523
OGYX01002192
175882
Actinomycetota
TGG
Pro
>WENV181940097
OGYX01017767
191955
Actinomycetota
TGT
Thr
>WENV181939663
OGYX01003593
459899
Actinomycetota
TTC
Glu
>WENV181939639
OGYX01003299
480319
Actinomycetota
TTG
Gln
>WENV181939393
OGYX01001305
280450
Actinomycetota
TTT
Lys
>WENV181939851
OGYX01007157
280450
Actinomycetota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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