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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181967144
OGZV01002099
179231
Actinomycetota
TAC
Val
>WENV181966610
OGZV01000124
176499
Actinomycetota
CAT
Met
>WENV181966915
OGZV01000849
175907
Actinomycetota
TAC
Val
>WENV181966876
OGZV01000620
280498
Actinomycetota
GTT
Asn
>WENV181967239
OGZV01002753
280498
Actinomycetota
GTT
Asn
>WENV181967421
OGZV01004998
280498
Actinomycetota
GTT
Asn
>WENV181967422
OGZV01004998
295964
Actinomycetota
GTT
Asn
>WENV181966819
OGZV01000450
459899
Actinomycetota
TTC
Glu
>WENV181967343
OGZV01003753
56083
Actinomycetota
CGA
Ser
>WENV181967170
OGZV01002229
140768
Actinomycetota
TAG
Leu
>WENV181967573
OGZV01009319
140768
Actinomycetota
TAG
Leu
>WENV181966993
OGZV01001264
176075
Actinomycetota
TCT
Arg
>WENV181966758
OGZV01000349
175848
Actinomycetota
TGG
Pro
>WENV181967039
OGZV01001559
176078
Actinomycetota
GGG
Pro
>WENV181966716
OGZV01000274
59689
Actinomycetota
GGA
Ser
>WENV181966808
OGZV01000435
175837
Actinomycetota
ACG
Arg
>WENV181967456
OGZV01005947
175837
Actinomycetota
ACG
Arg
>WENV181966858
OGZV01000547
29393
Actinomycetota
GCT
Ser
>WENV181967444
OGZV01005562
280549
Actinomycetota
CAC
Val
>WENV181966698
OGZV01000247
398947
Actinomycetota
CCA
Trp
>WENV181967083
OGZV01001778
280702
Actinomycetota
GGC
Ala
>WENV181967268
OGZV01003086
176077
Actinomycetota
CAT
Met
>WENV181967152
OGZV01002136
21508
Actinomycetota
GAG
Leu
>WENV181966648
OGZV01000167
176638
Actinomycetota
GGG
Pro
>WENV181967228
OGZV01002623
280524
Actinomycetota
TGC
Ala
>WENV181966756
OGZV01000349
150272
Actinomycetota
TAA
Leu
>WENV181966856
OGZV01000547
117777
Actinomycetota
>WENV181967686
OGZV01014942
280523
Actinomycetota
GGC
Ala
>WENV181966857
OGZV01000547
175949
Actinomycetota
CAT
Met
>WENV181967031
OGZV01001507
191955
Actinomycetota
TGT
Thr
>WENV181966945
OGZV01001023
175841
Actinomycetota
TAT
Ile
>WENV181967397
OGZV01004609
280544
Actinomycetota
GTG
His
>WENV181967171
OGZV01002229
280496
Actinomycetota
CGT
Thr
>WENV181966818
OGZV01000450
175872
Actinomycetota
GTC
Asp
>WENV181966785
OGZV01000387
280703
Actinomycetota
CCT
Arg
>WENV181966611
OGZV01000124
20205
Actinomycetota
GCT
Ser
>WENV181966747
OGZV01000333
280450
Actinomycetota
TTT
Lys
>WENV181967169
OGZV01002229
323758
Actinomycetota
CGT
Thr
>WENV181967181
OGZV01002245
358727
Actinomycetota
CCG
Arg
>WENV181966996
OGZV01001270
480329
Actinomycetota
CCC
Gly
>WENV181966741
OGZV01000316
175882
Actinomycetota
TGG
Pro
>WENV181967030
OGZV01001505
20209
Actinomycetota
GAG
Leu
>WENV181967359
OGZV01004129
99865
Actinomycetota
CAG
Leu
>WENV181966906
OGZV01000804
222475
Actinomycetota
CTT
Lys
>WENV181966861
OGZV01000572
280489
Actinomycetota
CTC
Glu
>WENV181966784
OGZV01000386
280499
Actinomycetota
CCT
Arg
>WENV181966862
OGZV01000572
398853
Actinomycetota
CTG
Gln
>WENV181967081
OGZV01001776
398853
Actinomycetota
CTG
Gln
>WENV181966740
OGZV01000316
175843
Actinomycetota
CAA
Leu
>WENV181966757
OGZV01000349
175843
Actinomycetota
CAA
Leu
>WENV181966697
OGZV01000247
3983
Actinomycetota
GCT
Ser
>WENV181967352
OGZV01003942
203883
Actinomycetota
TCT
Arg
>WENV181967198
OGZV01002369
56075
Actinomycetota
TGA
Ser
>WENV181967670
OGZV01013919
46642
Actinomycetota
CGA
Ser
>WENV181966982
OGZV01001200
104211
Actinomycetota
CAG
Leu
>WENV181966609
OGZV01000124
117903
Actinomycetota
GTA
Tyr
>WENV181967430
OGZV01005075
56071
Actinomycetota
TGA
Ser
>WENV181967370
OGZV01004358
147796
Actinomycetota
TAA
Leu
>WENV181967082
OGZV01001778
506175
Actinomycetota
TTG
Gln
>WENV181967572
OGZV01009319
280470
Actinomycetota
CGT
Thr
>WENV181967260
OGZV01003021
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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