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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182099189
OHHR01000233
235174
Actinomycetota
TGC
Ala
>WENV182099190
OHHR01000233
235173
Actinomycetota
GGC
Ala
>WENV182099238
OHHR01000352
411554
Actinomycetota
CCC
Gly
>WENV182099267
OHHR01000457
235101
Actinomycetota
TTT
Lys
>WENV182099285
OHHR01000553
144593
Actinomycetota
TAT
Ile
>WENV182099291
OHHR01000561
338148
Actinomycetota
CTG
Gln
>WENV182099301
OHHR01000601
37070
Actinomycetota
CGA
Ser
>WENV182099316
OHHR01000645
414234
Actinomycetota
CTG
Gln
>WENV182099327
OHHR01000688
80622
Actinomycetota
CAG
Leu
>WENV182099336
OHHR01000744
113601
Actinomycetota
TAG
Leu
>WENV182099335
OHHR01000744
235121
Actinomycetota
CGT
Thr
>WENV182099410
OHHR01001227
235148
Actinomycetota
GTT
Asn
>WENV182099413
OHHR01001278
278447
Actinomycetota
GTG
His
>WENV182099426
OHHR01001330
235092
Actinomycetota
CCG
Arg
>WENV182099433
OHHR01001385
235149
Actinomycetota
CCT
Arg
>WENV182099443
OHHR01001489
144635
Actinomycetota
TGG
Pro
>WENV182099466
OHHR01001790
158513
Actinomycetota
TGG
Pro
>WENV182099476
OHHR01001845
198659
Actinomycetota
TAC
Val
>WENV182099479
OHHR01001861
144589
Actinomycetota
ACG
Arg
>WENV182099489
OHHR01002093
145343
Actinomycetota
GGG
Pro
>WENV182099496
OHHR01002280
16219
Actinomycetota
GCT
Ser
>WENV182099516
OHHR01002629
144636
Actinomycetota
GAT
Ile
>WENV182099540
OHHR01003030
144595
Actinomycetota
CAA
Leu
>WENV182099547
OHHR01003400
153948
Actinomycetota
GGG
Pro
>WENV182099549
OHHR01003423
338139
Actinomycetota
GTT
Asn
>WENV182099555
OHHR01003568
245301
Actinomycetota
GCC
Gly
>WENV182099661
OHHR01007235
176456
Actinomycetota
TCT
Arg
>WENV182099688
OHHR01008698
98279
Actinomycetota
GTA
Tyr
>WENV182099709
OHHR01010460
413665
Actinomycetota
TTG
Gln
>WENV182099715
OHHR01010768
119475
Actinomycetota
TAA
Leu
>WENV182099716
OHHR01010778
16223
Actinomycetota
GAG
Leu
>WENV182099872
OHHR01032524
144625
Actinomycetota
GTC
Asp
>WENV182099894
OHHR01038837
44851
Actinomycetota
TGA
Ser
>WENV182099913
OHHR01043658
235146
Actinomycetota
CGT
Thr
>WENV182099917
OHHR01045387
201717
Actinomycetota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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