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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182294282
OHWD01009385
179231
Actinomycetota
TAC
Val
>WENV182294476
OHWD01036284
175883
Actinomycetota
GAT
Ile
>WENV182294521
OHWD01047537
316729
Actinomycetota
CAC
Val
>WENV182294171
OHWD01001576
140768
Actinomycetota
TAG
Leu
>WENV182294358
OHWD01015721
280441
Actinomycetota
CCG
Arg
>WENV182294351
OHWD01014497
117777
Actinomycetota
>WENV182294352
OHWD01014497
175949
Actinomycetota
CAT
Met
>WENV182294199
OHWD01002972
191955
Actinomycetota
TGT
Thr
>WENV182294442
OHWD01028273
175841
Actinomycetota
TAT
Ile
>WENV182294212
OHWD01003934
280450
Actinomycetota
TTT
Lys
>WENV182294443
OHWD01028604
480329
Actinomycetota
CCC
Gly
>WENV182294500
OHWD01042423
20209
Actinomycetota
GAG
Leu
>WENV182294291
OHWD01010188
480319
Actinomycetota
TTG
Gln
>WENV182294271
OHWD01008230
280499
Actinomycetota
CCT
Arg
>WENV182294322
OHWD01012226
398853
Actinomycetota
CTG
Gln
>WENV182294364
OHWD01016007
46642
Actinomycetota
CGA
Ser
>WENV182294381
OHWD01017610
56071
Actinomycetota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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