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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182314722
OHYA01025139
175883
Actinomycetota
GAT
Ile
>WENV182314556
OHYA01004910
280503
Actinomycetota
CCT
Arg
>WENV182314758
OHYA01033809
459899
Actinomycetota
TTC
Glu
>WENV182314667
OHYA01015044
176639
Actinomycetota
CGG
Pro
>WENV182314759
OHYA01034097
176500
Actinomycetota
CAT
Met
>WENV182314778
OHYA01037122
281241
Actinomycetota
CCG
Arg
>WENV182314572
OHYA01005467
241064
Actinomycetota
CTC
Glu
>WENV182314779
OHYA01037628
280523
Actinomycetota
GGC
Ala
>WENV182314548
OHYA01004513
175926
Actinomycetota
CAT
Met
>WENV182314571
OHYA01005467
483206
Actinomycetota
CTG
Gln
>WENV182314810
OHYA01047594
175882
Actinomycetota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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