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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182344908
OIAM01003322
235153
Actinomycetota
CCT
Arg
>WENV182344984
OIAM01014626
235092
Actinomycetota
CCG
Arg
>WENV182344900
OIAM01002756
245301
Actinomycetota
GCC
Gly
>WENV182344968
OIAM01009195
235174
Actinomycetota
TGC
Ala
>WENV182344942
OIAM01005942
153948
Actinomycetota
GGG
Pro
>WENV182344976
OIAM01010860
411554
Actinomycetota
CCC
Gly
>WENV182344918
OIAM01003972
113601
Actinomycetota
TAG
Leu
>WENV182344917
OIAM01003972
235121
Actinomycetota
CGT
Thr
>WENV182344836
OIAM01000612
61501
Actinomycetota
CAG
Leu
>WENV182344869
OIAM01001000
158513
Actinomycetota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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