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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182445885
OIKY01011305
119475
Actinomycetota
TAA
Leu
>WENV182445921
OIKY01017345
235174
Actinomycetota
TGC
Ala
>WENV182445969
OIKY01030563
145423
Actinomycetota
TCT
Arg
>WENV182445975
OIKY01034356
147732
Actinomycetota
GTC
Asp
>WENV182445894
OIKY01011766
413665
Actinomycetota
TTG
Gln
>WENV182445931
OIKY01019286
338148
Actinomycetota
CTG
Gln
>WENV182445929
OIKY01019161
237794
Actinomycetota
CCG
Arg
>WENV182445928
OIKY01019079
411554
Actinomycetota
CCC
Gly
>WENV182445847
OIKY01007072
113601
Actinomycetota
TAG
Leu
>WENV182445846
OIKY01007072
235121
Actinomycetota
CGT
Thr
>WENV182445946
OIKY01023007
47164
Actinomycetota
GGA
Ser
>WENV182445852
OIKY01007502
235173
Actinomycetota
GGC
Ala
>WENV182445851
OIKY01007502
267574
Actinomycetota
CAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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