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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182455249
OIMO01016508
145347
Actinomycetota
CAA
Leu
>WENV182455293
OIMO01024477
80622
Actinomycetota
CAG
Leu
>WENV182455284
OIMO01023467
411554
Actinomycetota
CCC
Gly
>WENV182455287
OIMO01024024
254857
Actinomycetota
CCG
Arg
>WENV182455286
OIMO01023694
235348
Actinomycetota
CCT
Arg
>WENV182455262
OIMO01018527
313386
Actinomycetota
CGT
Thr
>WENV182455255
OIMO01017385
356045
Actinomycetota
GAC
Val
>WENV182455129
OIMO01003545
144636
Actinomycetota
GAT
Ile
>WENV182455232
OIMO01015081
412834
Actinomycetota
GCA
Cys
>WENV182455231
OIMO01015081
245301
Actinomycetota
GCC
Gly
>WENV182455175
OIMO01008235
47164
Actinomycetota
GGA
Ser
>WENV182455193
OIMO01010913
235173
Actinomycetota
GGC
Ala
>WENV182455312
OIMO01031048
153948
Actinomycetota
GGG
Pro
>WENV182455306
OIMO01028947
98279
Actinomycetota
GTA
Tyr
>WENV182455263
OIMO01018527
113601
Actinomycetota
TAG
Leu
>WENV182455257
OIMO01017440
145423
Actinomycetota
TCT
Arg
>WENV182455178
OIMO01008407
393408
Actinomycetota
TTC
Glu
>WENV182455200
OIMO01011710
413665
Actinomycetota
TTG
Gln
>WENV182455261
OIMO01018317
235101
Actinomycetota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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