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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182470523
OIPG01023605
117777
Actinomycetota
>WENV182470450
OIPG01011036
104211
Actinomycetota
CAG
Leu
>WENV182470348
OIPG01002248
480376
Actinomycetota
CCC
Gly
>WENV182470457
OIPG01012412
317680
Actinomycetota
CCG
Arg
>WENV182470521
OIPG01023346
280499
Actinomycetota
CCT
Arg
>WENV182470519
OIPG01023165
56083
Actinomycetota
CGA
Ser
>WENV182470490
OIPG01018534
280489
Actinomycetota
CTC
Glu
>WENV182470491
OIPG01018534
398853
Actinomycetota
CTG
Gln
>WENV182470460
OIPG01012730
291585
Actinomycetota
GCC
Gly
>WENV182470445
OIPG01010620
29393
Actinomycetota
GCT
Ser
>WENV182470427
OIPG01008587
280702
Actinomycetota
GGC
Ala
>WENV182470496
OIPG01019229
176638
Actinomycetota
GGG
Pro
>WENV182470484
OIPG01017086
179231
Actinomycetota
TAC
Val
>WENV182470426
OIPG01008587
280524
Actinomycetota
TGC
Ala
>WENV182470465
OIPG01013900
191955
Actinomycetota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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