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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182743359
OJQQ01000193
95593
Actinomycetota
>WENV182743327
OJQQ01000116
147146
Actinomycetota
ACG
Arg
>WENV182743330
OJQQ01000121
144595
Actinomycetota
CAA
Leu
>WENV182743313
OJQQ01000099
235199
Actinomycetota
CAC
Val
>WENV182743226
OJQQ01000014
80622
Actinomycetota
CAG
Leu
>WENV182743360
OJQQ01000193
144700
Actinomycetota
CAT
Met
>WENV182743366
OJQQ01000213
144825
Actinomycetota
CAT
Met
>WENV182743230
OJQQ01000014
411601
Actinomycetota
CCC
Gly
>WENV182743310
OJQQ01000099
235092
Actinomycetota
CCG
Arg
>WENV182743322
OJQQ01000114
235348
Actinomycetota
CCT
Arg
>WENV182743352
OJQQ01000164
44862
Actinomycetota
CGA
Ser
>WENV182743321
OJQQ01000113
235146
Actinomycetota
CGT
Thr
>WENV182743319
OJQQ01000113
235121
Actinomycetota
CGT
Thr
>WENV182743231
OJQQ01000014
243671
Actinomycetota
CTC
Glu
>WENV182743232
OJQQ01000014
338148
Actinomycetota
CTG
Gln
>WENV182743398
OJQQ01000329
17009
Actinomycetota
GAG
Leu
>WENV182743361
OJQQ01000193
23370
Actinomycetota
GCT
Ser
>WENV182743225
OJQQ01000014
44929
Actinomycetota
GGA
Ser
>WENV182743325
OJQQ01000116
235347
Actinomycetota
GGC
Ala
>WENV182743326
OJQQ01000116
235347
Actinomycetota
GGC
Ala
>WENV182743399
OJQQ01000340
144826
Actinomycetota
GGG
Pro
>WENV182743333
OJQQ01000126
147734
Actinomycetota
GTC
Asp
>WENV182743332
OJQQ01000126
147734
Actinomycetota
GTC
Asp
>WENV182743248
OJQQ01000029
235194
Actinomycetota
GTG
His
>WENV182743428
OJQQ01000510
235148
Actinomycetota
GTT
Asn
>WENV182743401
OJQQ01000346
235148
Actinomycetota
GTT
Asn
>WENV182743429
OJQQ01000510
243162
Actinomycetota
GTT
Asn
>WENV182743329
OJQQ01000121
121510
Actinomycetota
TAA
Leu
>WENV182743316
OJQQ01000103
144660
Actinomycetota
TAC
Val
>WENV182743320
OJQQ01000113
113601
Actinomycetota
TAG
Leu
>WENV182743247
OJQQ01000029
144823
Actinomycetota
TCT
Arg
>WENV182743356
OJQQ01000179
44855
Actinomycetota
TGA
Ser
>WENV182743228
OJQQ01000014
235174
Actinomycetota
TGC
Ala
>WENV182743371
OJQQ01000226
144600
Actinomycetota
TGG
Pro
>WENV182743331
OJQQ01000126
338239
Actinomycetota
TTC
Glu
>WENV182743324
OJQQ01000116
413665
Actinomycetota
TTG
Gln
>WENV182743286
OJQQ01000069
235101
Actinomycetota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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