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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182809645
OJWS01000007
147158
Actinomycetota
TTT
Lys
>WENV182809834
OJWS01006138
413566
Actinomycetota
CCC
Gly
>WENV182809724
OJWS01000140
121519
Actinomycetota
TTG
Gln
>WENV182809642
OJWS01000007
147155
Actinomycetota
GTC
Asp
>WENV182809676
OJWS01000027
237816
Actinomycetota
GGT
Thr
>WENV182809688
OJWS01000042
37209
Actinomycetota
GAG
Leu
>WENV182809694
OJWS01000045
147157
Actinomycetota
TAC
Val
>WENV182809637
OJWS01000006
80900
Actinomycetota
TGA
Ser
>WENV182809691
OJWS01000043
339641
Actinomycetota
GAC
Val
>WENV182809626
OJWS01000001
415620
Actinomycetota
TCC
Gly
>WENV182809656
OJWS01000012
158275
Actinomycetota
GTC
Asp
>WENV182809695
OJWS01000045
339640
Actinomycetota
CTG
Gln
>WENV182809644
OJWS01000007
421345
Actinomycetota
CCC
Gly
>WENV182809726
OJWS01000153
152190
Actinomycetota
GAT
Ile
>WENV182809746
OJWS01000253
237815
Actinomycetota
CTT
Lys
>WENV182809833
OJWS01005642
240123
Actinomycetota
TAC
Val
>WENV182809634
OJWS01000003
237808
Actinomycetota
TGC
Ala
>WENV182809705
OJWS01000058
162402
Actinomycetota
GGG
Pro
>WENV182809742
OJWS01000192
80899
Actinomycetota
CAG
Leu
>WENV182809639
OJWS01000006
266836
Actinomycetota
ACG
Arg
>WENV182809643
OJWS01000007
147156
Actinomycetota
GAA
Phe
>WENV182809728
OJWS01000154
237804
Actinomycetota
TGT
Thr
>WENV182809667
OJWS01000017
240124
Actinomycetota
CGT
Thr
>WENV182809677
OJWS01000027
338489
Actinomycetota
CAT
Met
>WENV182809666
OJWS01000017
37773
Actinomycetota
CGA
Ser
>WENV182809709
OJWS01000066
237803
Actinomycetota
CGT
Thr
>WENV182809696
OJWS01000045
237812
Actinomycetota
CTC
Glu
>WENV182809640
OJWS01000006
45149
Actinomycetota
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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