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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182818957
OKAA01000021
481233
Actinomycetota
CCC
Gly
>WENV182818943
OKAA01000012
175907
Actinomycetota
TAC
Val
>WENV182818937
OKAA01000005
280498
Actinomycetota
GTT
Asn
>WENV182818980
OKAA01000066
184065
Actinomycetota
TGG
Pro
>WENV182819020
OKAA01000162
295964
Actinomycetota
GTT
Asn
>WENV182819018
OKAA01000158
56083
Actinomycetota
CGA
Ser
>WENV182818960
OKAA01000024
140768
Actinomycetota
TAG
Leu
>WENV182818935
OKAA01000002
176075
Actinomycetota
TCT
Arg
>WENV182818965
OKAA01000033
176078
Actinomycetota
GGG
Pro
>WENV182818971
OKAA01000040
59689
Actinomycetota
GGA
Ser
>WENV182818949
OKAA01000015
175837
Actinomycetota
ACG
Arg
>WENV182818968
OKAA01000034
29393
Actinomycetota
GCT
Ser
>WENV182819004
OKAA01000118
280549
Actinomycetota
CAC
Val
>WENV182819055
OKAA01000431
184493
Actinomycetota
GGG
Pro
>WENV182819014
OKAA01000146
443526
Actinomycetota
CAC
Val
>WENV182818972
OKAA01000040
349164
Actinomycetota
CTC
Glu
>WENV182818948
OKAA01000015
280702
Actinomycetota
GGC
Ala
>WENV182818970
OKAA01000039
176077
Actinomycetota
CAT
Met
>WENV182818994
OKAA01000091
468909
Actinomycetota
CTG
Gln
>WENV182818936
OKAA01000004
21508
Actinomycetota
GAG
Leu
>WENV182819115
OKAA01001044
280524
Actinomycetota
TGC
Ala
>WENV182818976
OKAA01000048
398948
Actinomycetota
TTC
Glu
>WENV182818950
OKAA01000016
150272
Actinomycetota
TAA
Leu
>WENV182818966
OKAA01000034
117777
Actinomycetota
>WENV182818967
OKAA01000034
175949
Actinomycetota
CAT
Met
>WENV182818942
OKAA01000011
191955
Actinomycetota
TGT
Thr
>WENV182818934
OKAA01000002
280544
Actinomycetota
GTG
His
>WENV182818961
OKAA01000024
280496
Actinomycetota
CGT
Thr
>WENV182818998
OKAA01000098
280703
Actinomycetota
CCT
Arg
>WENV182818952
OKAA01000016
184157
Actinomycetota
TGG
Pro
>WENV182819003
OKAA01000118
468141
Actinomycetota
GAC
Val
>WENV182818959
OKAA01000024
323758
Actinomycetota
CGT
Thr
>WENV182818963
OKAA01000031
358727
Actinomycetota
CCG
Arg
>WENV182818956
OKAA01000021
99865
Actinomycetota
CAG
Leu
>WENV182818975
OKAA01000045
222475
Actinomycetota
CTT
Lys
>WENV182818973
OKAA01000040
398853
Actinomycetota
CTG
Gln
>WENV182818951
OKAA01000016
175843
Actinomycetota
CAA
Leu
>WENV182819114
OKAA01001044
179238
Actinomycetota
GAT
Ile
>WENV182818947
OKAA01000015
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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