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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182842464
OKIE01001060
140768
Actinomycetota
TAG
Leu
>WENV182842466
OKIE01001106
20208
Actinomycetota
GAG
Leu
>WENV182842468
OKIE01001153
152047
Actinomycetota
ACG
Arg
>WENV182842465
OKIE01001068
59689
Actinomycetota
GGA
Ser
>WENV182842481
OKIE01001497
29393
Actinomycetota
GCT
Ser
>WENV182842490
OKIE01001865
280549
Actinomycetota
CAC
Val
>WENV182842491
OKIE01001985
280702
Actinomycetota
GGC
Ala
>WENV182842492
OKIE01002226
176077
Actinomycetota
CAT
Met
>WENV182842436
OKIE01000584
280524
Actinomycetota
TGC
Ala
>WENV182842485
OKIE01001778
398948
Actinomycetota
TTC
Glu
>WENV182842502
OKIE01002861
280544
Actinomycetota
GTG
His
>WENV182842489
OKIE01001865
468141
Actinomycetota
GAC
Val
>WENV182842463
OKIE01001060
323758
Actinomycetota
CGT
Thr
>WENV182842461
OKIE01000951
175843
Actinomycetota
CAA
Leu
>WENV182842486
OKIE01001812
56075
Actinomycetota
TGA
Ser
>WENV182842435
OKIE01000584
179238
Actinomycetota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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