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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182847054
OKJV01000061
175907
Actinomycetota
TAC
Val
>WENV182847113
OKJV01000120
280498
Actinomycetota
GTT
Asn
>WENV182847162
OKJV01000259
295964
Actinomycetota
GTT
Asn
>WENV182847106
OKJV01000110
56083
Actinomycetota
CGA
Ser
>WENV182847155
OKJV01000223
140768
Actinomycetota
TAG
Leu
>WENV182847026
OKJV01000016
176075
Actinomycetota
TCT
Arg
>WENV182847160
OKJV01000253
176078
Actinomycetota
GGG
Pro
>WENV182847148
OKJV01000211
59689
Actinomycetota
GGA
Ser
>WENV182847147
OKJV01000209
175837
Actinomycetota
ACG
Arg
>WENV182847153
OKJV01000219
175837
Actinomycetota
ACG
Arg
>WENV182847130
OKJV01000148
29393
Actinomycetota
GCT
Ser
>WENV182847159
OKJV01000252
280549
Actinomycetota
CAC
Val
>WENV182847062
OKJV01000072
349164
Actinomycetota
CTC
Glu
>WENV182847142
OKJV01000203
280702
Actinomycetota
GGC
Ala
>WENV182847158
OKJV01000252
434162
Actinomycetota
GAC
Val
>WENV182847058
OKJV01000069
176077
Actinomycetota
CAT
Met
>WENV182847047
OKJV01000046
21508
Actinomycetota
GAG
Leu
>WENV182847052
OKJV01000056
280524
Actinomycetota
TGC
Ala
>WENV182847150
OKJV01000213
398948
Actinomycetota
TTC
Glu
>WENV182847027
OKJV01000016
150272
Actinomycetota
TAA
Leu
>WENV182847128
OKJV01000148
117777
Actinomycetota
>WENV182847129
OKJV01000148
175949
Actinomycetota
CAT
Met
>WENV182847050
OKJV01000056
191955
Actinomycetota
TGT
Thr
>WENV182847025
OKJV01000016
280544
Actinomycetota
GTG
His
>WENV182847108
OKJV01000113
280496
Actinomycetota
CGT
Thr
>WENV182847059
OKJV01000069
280703
Actinomycetota
CCT
Arg
>WENV182847143
OKJV01000203
184157
Actinomycetota
TGG
Pro
>WENV182847154
OKJV01000223
323758
Actinomycetota
CGT
Thr
>WENV182847156
OKJV01000252
358727
Actinomycetota
CCG
Arg
>WENV182847122
OKJV01000136
99865
Actinomycetota
CAG
Leu
>WENV182847043
OKJV01000036
222475
Actinomycetota
CTT
Lys
>WENV182847063
OKJV01000072
398853
Actinomycetota
CTG
Gln
>WENV182847028
OKJV01000016
175843
Actinomycetota
CAA
Leu
>WENV182847152
OKJV01000217
56075
Actinomycetota
TGA
Ser
>WENV182847051
OKJV01000056
179238
Actinomycetota
GAT
Ile
>WENV182847141
OKJV01000203
506175
Actinomycetota
TTG
Gln
>WENV182847061
OKJV01000072
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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