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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183183222
OLPL01000002
285746
Actinomycetota
GGC
Ala
>WENV183183254
OLPL01000014
291585
Actinomycetota
GCC
Gly
>WENV183183255
OLPL01000014
481719
Actinomycetota
GCA
Cys
>WENV183183257
OLPL01000014
180826
Actinomycetota
GGG
Pro
>WENV183183289
OLPL01000029
280503
Actinomycetota
CCT
Arg
>WENV183183394
OLPL01000201
280536
Actinomycetota
CTT
Lys
>WENV183183416
OLPL01000241
191955
Actinomycetota
TGT
Thr
>WENV183183424
OLPL01000265
175841
Actinomycetota
TAT
Ile
>WENV183183466
OLPL01000404
280450
Actinomycetota
TTT
Lys
>WENV183183472
OLPL01000420
117903
Actinomycetota
GTA
Tyr
>WENV183183473
OLPL01000420
176499
Actinomycetota
CAT
Met
>WENV183183474
OLPL01000420
20205
Actinomycetota
GCT
Ser
>WENV183183477
OLPL01000425
20209
Actinomycetota
GAG
Leu
>WENV183183520
OLPL01000543
398843
Actinomycetota
GTT
Asn
>WENV183183526
OLPL01000569
59689
Actinomycetota
GGA
Ser
>WENV183183542
OLPL01000632
480376
Actinomycetota
CCC
Gly
>WENV183183552
OLPL01000664
46642
Actinomycetota
CGA
Ser
>WENV183183556
OLPL01000675
99865
Actinomycetota
CAG
Leu
>WENV183183564
OLPL01000700
280703
Actinomycetota
CCT
Arg
>WENV183183603
OLPL01000910
175907
Actinomycetota
TAC
Val
>WENV183183604
OLPL01000921
147796
Actinomycetota
TAA
Leu
>WENV183183619
OLPL01001018
280489
Actinomycetota
CTC
Glu
>WENV183183620
OLPL01001018
418858
Actinomycetota
CTG
Gln
>WENV183183625
OLPL01001049
56083
Actinomycetota
CGA
Ser
>WENV183183710
OLPL01001412
29393
Actinomycetota
GCT
Ser
>WENV183183713
OLPL01001458
323758
Actinomycetota
CGT
Thr
>WENV183183714
OLPL01001458
140768
Actinomycetota
TAG
Leu
>WENV183183715
OLPL01001458
280496
Actinomycetota
CGT
Thr
>WENV183183721
OLPL01001527
179231
Actinomycetota
TAC
Val
>WENV183183728
OLPL01001607
175837
Actinomycetota
ACG
Arg
>WENV183183734
OLPL01001659
56071
Actinomycetota
TGA
Ser
>WENV183183741
OLPL01001682
150272
Actinomycetota
TAA
Leu
>WENV183183744
OLPL01001689
317680
Actinomycetota
CCG
Arg
>WENV183183748
OLPL01001728
203883
Actinomycetota
TCT
Arg
>WENV183183754
OLPL01001781
280498
Actinomycetota
GTT
Asn
>WENV183183765
OLPL01001874
175843
Actinomycetota
CAA
Leu
>WENV183183766
OLPL01001874
175882
Actinomycetota
TGG
Pro
>WENV183183786
OLPL01002174
482604
Actinomycetota
TTG
Gln
>WENV183183787
OLPL01002174
280702
Actinomycetota
GGC
Ala
>WENV183183809
OLPL01002379
176075
Actinomycetota
TCT
Arg
>WENV183183812
OLPL01002418
280523
Actinomycetota
GGC
Ala
>WENV183183813
OLPL01002474
176077
Actinomycetota
CAT
Met
>WENV183183819
OLPL01002587
175843
Actinomycetota
CAA
Leu
>WENV183183839
OLPL01002821
56075
Actinomycetota
TGA
Ser
>WENV183183869
OLPL01003258
175883
Actinomycetota
GAT
Ile
>WENV183183882
OLPL01003749
280524
Actinomycetota
TGC
Ala
>WENV183183934
OLPL01004995
280470
Actinomycetota
CGT
Thr
>WENV183183935
OLPL01004995
140768
Actinomycetota
TAG
Leu
>WENV183183942
OLPL01005285
398948
Actinomycetota
TTC
Glu
>WENV183183971
OLPL01006303
483206
Actinomycetota
CTG
Gln
>WENV183183975
OLPL01006322
175837
Actinomycetota
ACG
Arg
>WENV183183980
OLPL01006620
480329
Actinomycetota
CCC
Gly
>WENV183183988
OLPL01006816
280499
Actinomycetota
CCT
Arg
>WENV183184031
OLPL01009094
175848
Actinomycetota
TGG
Pro
>WENV183184035
OLPL01009303
280549
Actinomycetota
CAC
Val
>WENV183184069
OLPL01012210
280544
Actinomycetota
GTG
His
>WENV183184076
OLPL01012921
180826
Actinomycetota
GGG
Pro
>WENV183184083
OLPL01013912
117777
Actinomycetota
>WENV183184085
OLPL01014296
14009
Actinomycetota
GGA
Ser
>WENV183184101
OLPL01017981
283352
Actinomycetota
GCC
Gly
>WENV183184141
OLPL01023634
175926
Actinomycetota
CAT
Met
>WENV183184147
OLPL01024651
295964
Actinomycetota
GTT
Asn
>WENV183184178
OLPL01030952
484283
Actinomycetota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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