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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183220290
OLQL01000005
37212
Actinomycetota
GAG
Leu
>WENV183220298
OLQL01000007
235092
Actinomycetota
CCG
Arg
>WENV183220303
OLQL01000007
44929
Actinomycetota
GGA
Ser
>WENV183220296
OLQL01000007
235101
Actinomycetota
TTT
Lys
>WENV183220301
OLQL01000007
235199
Actinomycetota
CAC
Val
>WENV183220294
OLQL01000007
243671
Actinomycetota
CTC
Glu
>WENV183220295
OLQL01000007
338148
Actinomycetota
CTG
Gln
>WENV183220351
OLQL01000028
144826
Actinomycetota
GGG
Pro
>WENV183220349
OLQL01000028
235199
Actinomycetota
CAC
Val
>WENV183220376
OLQL01000039
235174
Actinomycetota
TGC
Ala
>WENV183220384
OLQL01000042
245301
Actinomycetota
GCC
Gly
>WENV183220387
OLQL01000042
61501
Actinomycetota
CAG
Leu
>WENV183220397
OLQL01000051
17009
Actinomycetota
GAG
Leu
>WENV183220460
OLQL01000101
243162
Actinomycetota
GTT
Asn
>WENV183220459
OLQL01000101
243162
Actinomycetota
GTT
Asn
>WENV183220465
OLQL01000105
338239
Actinomycetota
TTC
Glu
>WENV183220464
OLQL01000105
147734
Actinomycetota
GTC
Asp
>WENV183220463
OLQL01000105
147734
Actinomycetota
GTC
Asp
>WENV183220474
OLQL01000111
23370
Actinomycetota
GCT
Ser
>WENV183220475
OLQL01000111
44862
Actinomycetota
CGA
Ser
>WENV183220473
OLQL01000111
144700
Actinomycetota
CAT
Met
>WENV183220472
OLQL01000111
95593
Actinomycetota
>WENV183220478
OLQL01000118
235194
Actinomycetota
GTG
His
>WENV183220504
OLQL01000154
235347
Actinomycetota
GGC
Ala
>WENV183220505
OLQL01000154
235347
Actinomycetota
GGC
Ala
>WENV183220506
OLQL01000154
144600
Actinomycetota
TGG
Pro
>WENV183220508
OLQL01000154
147146
Actinomycetota
ACG
Arg
>WENV183220507
OLQL01000154
147146
Actinomycetota
ACG
Arg
>WENV183220503
OLQL01000154
413665
Actinomycetota
TTG
Gln
>WENV183220517
OLQL01000157
235348
Actinomycetota
CCT
Arg
>WENV183220585
OLQL01000238
121510
Actinomycetota
TAA
Leu
>WENV183220586
OLQL01000238
144595
Actinomycetota
CAA
Leu
>WENV183220594
OLQL01000255
235153
Actinomycetota
CCT
Arg
>WENV183220673
OLQL01000313
240009
Actinomycetota
GGC
Ala
>WENV183220691
OLQL01000335
144823
Actinomycetota
TCT
Arg
>WENV183220695
OLQL01000337
235146
Actinomycetota
CGT
Thr
>WENV183220694
OLQL01000337
113601
Actinomycetota
TAG
Leu
>WENV183220693
OLQL01000337
235121
Actinomycetota
CGT
Thr
>WENV183220801
OLQL01000529
44855
Actinomycetota
TGA
Ser
>WENV183220826
OLQL01000632
37212
Actinomycetota
GAG
Leu
>WENV183220899
OLQL01000859
144636
Actinomycetota
GAT
Ile
>WENV183220897
OLQL01000859
144636
Actinomycetota
GAT
Ile
>WENV183220905
OLQL01000883
144825
Actinomycetota
CAT
Met
>WENV183220917
OLQL01000940
411601
Actinomycetota
CCC
Gly
>WENV183220916
OLQL01000940
80622
Actinomycetota
CAG
Leu
>WENV183220951
OLQL01001043
144660
Actinomycetota
TAC
Val
>WENV183221087
OLQL01001591
235153
Actinomycetota
CCT
Arg
>WENV183221151
OLQL01001937
414234
Actinomycetota
CTG
Gln
>WENV183221219
OLQL01002536
153915
Actinomycetota
ACG
Arg
>WENV183221218
OLQL01002536
153915
Actinomycetota
ACG
Arg
>WENV183221217
OLQL01002536
153915
Actinomycetota
ACG
Arg
>WENV183221216
OLQL01002536
61501
Actinomycetota
CAG
Leu
>WENV183221399
OLQL01004822
240009
Actinomycetota
GGC
Ala
>WENV183221419
OLQL01005157
245301
Actinomycetota
GCC
Gly
>WENV183221418
OLQL01005157
245301
Actinomycetota
GCC
Gly
>WENV183221416
OLQL01005157
245301
Actinomycetota
GCC
Gly
>WENV183221417
OLQL01005157
412834
Actinomycetota
GCA
Cys
>WENV183221528
OLQL01008563
338139
Actinomycetota
GTT
Asn
>WENV183221527
OLQL01008563
338139
Actinomycetota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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