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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183438422
OMCF01000081
119475
Actinomycetota
TAA
Leu
>WENV183438599
OMCF01000953
235153
Actinomycetota
CCT
Arg
>WENV183438356
OMCF01000009
144589
Actinomycetota
ACG
Arg
>WENV183438353
OMCF01000006
37070
Actinomycetota
CGA
Ser
>WENV183438448
OMCF01000121
235092
Actinomycetota
CCG
Arg
>WENV183438870
OMCF01008941
245301
Actinomycetota
GCC
Gly
>WENV183438452
OMCF01000132
162208
Actinomycetota
TAC
Val
>WENV183438354
OMCF01000006
16219
Actinomycetota
GCT
Ser
>WENV183438347
OMCF01000005
235174
Actinomycetota
TGC
Ala
>WENV183438388
OMCF01000040
235101
Actinomycetota
TTT
Lys
>WENV183439211
OMCF01055249
121510
Actinomycetota
TAA
Leu
>WENV183438502
OMCF01000217
144625
Actinomycetota
GTC
Asp
>WENV183438812
OMCF01006124
153948
Actinomycetota
GGG
Pro
>WENV183439022
OMCF01021567
145345
Actinomycetota
TAC
Val
>WENV183438984
OMCF01017048
338236
Actinomycetota
GAA
Phe
>WENV183438375
OMCF01000025
16223
Actinomycetota
GAG
Leu
>WENV183438384
OMCF01000035
144593
Actinomycetota
TAT
Ile
>WENV183438367
OMCF01000018
238473
Actinomycetota
GTG
His
>WENV183438775
OMCF01004518
144636
Actinomycetota
GAT
Ile
>WENV183438351
OMCF01000006
98279
Actinomycetota
GTA
Tyr
>WENV183438540
OMCF01000424
338148
Actinomycetota
CTG
Gln
>WENV183439142
OMCF01038008
95687
Actinomycetota
TAG
Leu
>WENV183438563
OMCF01000593
235148
Actinomycetota
GTT
Asn
>WENV183438377
OMCF01000025
235148
Actinomycetota
GTT
Asn
>WENV183438376
OMCF01000025
235148
Actinomycetota
GTT
Asn
>WENV183438703
OMCF01002186
338139
Actinomycetota
GTT
Asn
>WENV183439185
OMCF01045042
235348
Actinomycetota
CCT
Arg
>WENV183438350
OMCF01000005
411554
Actinomycetota
CCC
Gly
>WENV183438359
OMCF01000011
113601
Actinomycetota
TAG
Leu
>WENV183438378
OMCF01000028
144595
Actinomycetota
CAA
Leu
>WENV183438370
OMCF01000018
145343
Actinomycetota
GGG
Pro
>WENV183438483
OMCF01000158
235149
Actinomycetota
CCT
Arg
>WENV183438669
OMCF01001827
414234
Actinomycetota
CTG
Gln
>WENV183438358
OMCF01000011
235121
Actinomycetota
CGT
Thr
>WENV183438379
OMCF01000028
144635
Actinomycetota
TGG
Pro
>WENV183438593
OMCF01000885
61501
Actinomycetota
CAG
Leu
>WENV183438345
OMCF01000005
80622
Actinomycetota
CAG
Leu
>WENV183438383
OMCF01000031
44851
Actinomycetota
TGA
Ser
>WENV183438956
OMCF01014936
7409
Actinomycetota
CGA
Ser
>WENV183438856
OMCF01008207
158513
Actinomycetota
TGG
Pro
>WENV183438498
OMCF01000203
235173
Actinomycetota
GGC
Ala
>WENV183438348
OMCF01000005
235173
Actinomycetota
GGC
Ala
>WENV183438924
OMCF01011659
95593
Actinomycetota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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