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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183473942
OMET01000274
179231
Actinomycetota
TAC
Val
>WENV183473925
OMET01000177
176499
Actinomycetota
CAT
Met
>WENV183474288
OMET01013879
175907
Actinomycetota
TAC
Val
>WENV183473906
OMET01000151
280498
Actinomycetota
GTT
Asn
>WENV183473922
OMET01000176
459899
Actinomycetota
TTC
Glu
>WENV183473839
OMET01000019
140768
Actinomycetota
TAG
Leu
>WENV183474411
OMET01037651
176075
Actinomycetota
TCT
Arg
>WENV183474100
OMET01002654
59689
Actinomycetota
GGA
Ser
>WENV183473880
OMET01000083
175837
Actinomycetota
ACG
Arg
>WENV183474170
OMET01005152
175837
Actinomycetota
ACG
Arg
>WENV183473908
OMET01000158
280441
Actinomycetota
CCG
Arg
>WENV183474282
OMET01012273
280702
Actinomycetota
GGC
Ala
>WENV183474246
OMET01009231
241064
Actinomycetota
CTC
Glu
>WENV183473948
OMET01000294
176638
Actinomycetota
GGG
Pro
>WENV183474055
OMET01001836
280524
Actinomycetota
TGC
Ala
>WENV183474300
OMET01015627
481719
Actinomycetota
GCA
Cys
>WENV183474361
OMET01025381
480374
Actinomycetota
TTG
Gln
>WENV183474301
OMET01015627
291585
Actinomycetota
GCC
Gly
>WENV183474448
OMET01048572
150272
Actinomycetota
TAA
Leu
>WENV183474312
OMET01016330
117777
Actinomycetota
>WENV183473947
OMET01000290
280523
Actinomycetota
GGC
Ala
>WENV183474313
OMET01016330
175949
Actinomycetota
CAT
Met
>WENV183473869
OMET01000067
175841
Actinomycetota
TAT
Ile
>WENV183473923
OMET01000176
175872
Actinomycetota
GTC
Asp
>WENV183473931
OMET01000208
20205
Actinomycetota
GCT
Ser
>WENV183473933
OMET01000222
280450
Actinomycetota
TTT
Lys
>WENV183473849
OMET01000025
480329
Actinomycetota
CCC
Gly
>WENV183474245
OMET01009231
483206
Actinomycetota
CTG
Gln
>WENV183474047
OMET01001742
175882
Actinomycetota
TGG
Pro
>WENV183473884
OMET01000086
20209
Actinomycetota
GAG
Leu
>WENV183474105
OMET01002798
480319
Actinomycetota
TTG
Gln
>WENV183474368
OMET01027062
280489
Actinomycetota
CTC
Glu
>WENV183473898
OMET01000137
280499
Actinomycetota
CCT
Arg
>WENV183474426
OMET01042991
297606
Actinomycetota
CCT
Arg
>WENV183474369
OMET01027062
398853
Actinomycetota
CTG
Gln
>WENV183474044
OMET01001618
175843
Actinomycetota
CAA
Leu
>WENV183474035
OMET01001444
203883
Actinomycetota
TCT
Arg
>WENV183473907
OMET01000156
46642
Actinomycetota
CGA
Ser
>WENV183473850
OMET01000025
104211
Actinomycetota
CAG
Leu
>WENV183473924
OMET01000177
117903
Actinomycetota
GTA
Tyr
>WENV183473957
OMET01000408
56071
Actinomycetota
TGA
Ser
>WENV183473946
OMET01000281
147796
Actinomycetota
TAA
Leu
>WENV183473838
OMET01000019
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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