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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183483846
OMFO01000003
175848
Actinomycetota
TGG
Pro
>WENV183483844
OMFO01000003
482604
Actinomycetota
TTG
Gln
>WENV183483849
OMFO01000003
175837
Actinomycetota
ACG
Arg
>WENV183483845
OMFO01000003
280702
Actinomycetota
GGC
Ala
>WENV183483843
OMFO01000003
21508
Actinomycetota
GAG
Leu
>WENV183483847
OMFO01000003
150272
Actinomycetota
TAA
Leu
>WENV183483848
OMFO01000003
175843
Actinomycetota
CAA
Leu
>WENV183483856
OMFO01000004
56083
Actinomycetota
CGA
Ser
>WENV183483855
OMFO01000004
29393
Actinomycetota
GCT
Ser
>WENV183483850
OMFO01000004
398948
Actinomycetota
TTC
Glu
>WENV183483853
OMFO01000004
117777
Actinomycetota
>WENV183483854
OMFO01000004
175949
Actinomycetota
CAT
Met
>WENV183483857
OMFO01000004
56075
Actinomycetota
TGA
Ser
>WENV183483873
OMFO01000017
418858
Actinomycetota
CTG
Gln
>WENV183483872
OMFO01000017
289788
Actinomycetota
CTC
Glu
>WENV183483884
OMFO01000025
59689
Actinomycetota
GGA
Ser
>WENV183483887
OMFO01000025
280441
Actinomycetota
CCG
Arg
>WENV183483885
OMFO01000025
280450
Actinomycetota
TTT
Lys
>WENV183483886
OMFO01000025
200276
Actinomycetota
CTT
Lys
>WENV183483923
OMFO01000055
140768
Actinomycetota
TAG
Leu
>WENV183483921
OMFO01000055
280549
Actinomycetota
CAC
Val
>WENV183483920
OMFO01000055
418252
Actinomycetota
GAC
Val
>WENV183483924
OMFO01000055
280496
Actinomycetota
CGT
Thr
>WENV183483922
OMFO01000055
280470
Actinomycetota
CGT
Thr
>WENV183483945
OMFO01000076
176077
Actinomycetota
CAT
Met
>WENV183483946
OMFO01000076
280703
Actinomycetota
CCT
Arg
>WENV183483953
OMFO01000087
191955
Actinomycetota
TGT
Thr
>WENV183483978
OMFO01000133
176075
Actinomycetota
TCT
Arg
>WENV183483977
OMFO01000133
280544
Actinomycetota
GTG
His
>WENV183483984
OMFO01000156
295964
Actinomycetota
GTT
Asn
>WENV183483989
OMFO01000171
175907
Actinomycetota
TAC
Val
>WENV183484001
OMFO01000194
295964
Actinomycetota
GTT
Asn
>WENV183484040
OMFO01000289
280524
Actinomycetota
TGC
Ala
>WENV183484039
OMFO01000289
179238
Actinomycetota
GAT
Ile
>WENV183484056
OMFO01000352
99865
Actinomycetota
CAG
Leu
>WENV183484057
OMFO01000352
480376
Actinomycetota
CCC
Gly
>WENV183484064
OMFO01000420
176078
Actinomycetota
GGG
Pro
>WENV183484366
OMFO01025345
287246
Actinomycetota
GGC
Ala
>WENV183484462
OMFO01058455
281241
Actinomycetota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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