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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183484946
OMFP01004024
179231
Actinomycetota
TAC
Val
>WENV183484641
OMFP01000263
176499
Actinomycetota
CAT
Met
>WENV183484835
OMFP01001857
175883
Actinomycetota
GAT
Ile
>WENV183485241
OMFP01025754
285746
Actinomycetota
GGC
Ala
>WENV183484855
OMFP01002189
280498
Actinomycetota
GTT
Asn
>WENV183484856
OMFP01002189
280498
Actinomycetota
GTT
Asn
>WENV183484940
OMFP01003912
280498
Actinomycetota
GTT
Asn
>WENV183484653
OMFP01000306
280503
Actinomycetota
CCT
Arg
>WENV183485269
OMFP01029540
295964
Actinomycetota
GTT
Asn
>WENV183484656
OMFP01000314
140768
Actinomycetota
TAG
Leu
>WENV183484613
OMFP01000185
175837
Actinomycetota
ACG
Arg
>WENV183485321
OMFP01036178
280549
Actinomycetota
CAC
Val
>WENV183484723
OMFP01000640
187349
Actinomycetota
TGG
Pro
>WENV183484765
OMFP01000951
280441
Actinomycetota
CCG
Arg
>WENV183484906
OMFP01003234
398843
Actinomycetota
GTT
Asn
>WENV183484779
OMFP01001129
176638
Actinomycetota
GGG
Pro
>WENV183484696
OMFP01000519
280524
Actinomycetota
TGC
Ala
>WENV183484670
OMFP01000416
291585
Actinomycetota
GCC
Gly
>WENV183484697
OMFP01000519
280523
Actinomycetota
GGC
Ala
>WENV183484864
OMFP01002280
280523
Actinomycetota
GGC
Ala
>WENV183484725
OMFP01000647
175841
Actinomycetota
TAT
Ile
>WENV183484811
OMFP01001472
280536
Actinomycetota
CTT
Lys
>WENV183484965
OMFP01004643
175872
Actinomycetota
GTC
Asp
>WENV183484642
OMFP01000266
20205
Actinomycetota
GCT
Ser
>WENV183484620
OMFP01000215
175926
Actinomycetota
CAT
Met
>WENV183484740
OMFP01000788
280450
Actinomycetota
TTT
Lys
>WENV183484578
OMFP01000125
480329
Actinomycetota
CCC
Gly
>WENV183484823
OMFP01001676
483206
Actinomycetota
CTG
Gln
>WENV183484999
OMFP01006087
20209
Actinomycetota
GAG
Leu
>WENV183484579
OMFP01000125
99865
Actinomycetota
CAG
Leu
>WENV183484842
OMFP01002031
480319
Actinomycetota
TTG
Gln
>WENV183484713
OMFP01000596
280489
Actinomycetota
CTC
Glu
>WENV183484630
OMFP01000241
280499
Actinomycetota
CCT
Arg
>WENV183484714
OMFP01000596
398853
Actinomycetota
CTG
Gln
>WENV183484722
OMFP01000640
175843
Actinomycetota
CAA
Leu
>WENV183484574
OMFP01000120
46642
Actinomycetota
CGA
Ser
>WENV183484640
OMFP01000263
117903
Actinomycetota
GTA
Tyr
>WENV183484575
OMFP01000120
56071
Actinomycetota
TGA
Ser
>WENV183484652
OMFP01000304
147796
Actinomycetota
TAA
Leu
>WENV183484655
OMFP01000314
280470
Actinomycetota
CGT
Thr
>WENV183485217
OMFP01021872
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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