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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183487311
OMFW01000931
179231
Actinomycetota
TAC
Val
>WENV183487320
OMFW01001625
176499
Actinomycetota
CAT
Met
>WENV183487345
OMFW01003221
280498
Actinomycetota
GTT
Asn
>WENV183487306
OMFW01000594
140768
Actinomycetota
TAG
Leu
>WENV183487415
OMFW01011628
175837
Actinomycetota
ACG
Arg
>WENV183487349
OMFW01003440
280441
Actinomycetota
CCG
Arg
>WENV183487394
OMFW01008090
280523
Actinomycetota
GGC
Ala
>WENV183487294
OMFW01000373
175872
Actinomycetota
GTC
Asp
>WENV183487302
OMFW01000549
280450
Actinomycetota
TTT
Lys
>WENV183487301
OMFW01000462
480329
Actinomycetota
CCC
Gly
>WENV183487360
OMFW01003707
175882
Actinomycetota
TGG
Pro
>WENV183487346
OMFW01003236
20209
Actinomycetota
GAG
Leu
>WENV183487313
OMFW01001218
480319
Actinomycetota
TTG
Gln
>WENV183487340
OMFW01002917
280489
Actinomycetota
CTC
Glu
>WENV183487357
OMFW01003528
280499
Actinomycetota
CCT
Arg
>WENV183487341
OMFW01002917
398853
Actinomycetota
CTG
Gln
>WENV183487377
OMFW01006245
175843
Actinomycetota
CAA
Leu
>WENV183487331
OMFW01002267
104211
Actinomycetota
CAG
Leu
>WENV183487319
OMFW01001625
117903
Actinomycetota
GTA
Tyr
>WENV183487305
OMFW01000594
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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