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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183488643
OMFZ01000145
175907
Actinomycetota
TAC
Val
>WENV183488582
OMFZ01000053
349003
Actinomycetota
CCG
Arg
>WENV183488748
OMFZ01000521
295964
Actinomycetota
GTT
Asn
>WENV183488608
OMFZ01000084
56083
Actinomycetota
CGA
Ser
>WENV183488648
OMFZ01000155
140768
Actinomycetota
TAG
Leu
>WENV183488645
OMFZ01000150
176075
Actinomycetota
TCT
Arg
>WENV183488552
OMFZ01000023
175848
Actinomycetota
TGG
Pro
>WENV183488659
OMFZ01000166
176078
Actinomycetota
GGG
Pro
>WENV183488674
OMFZ01000203
482604
Actinomycetota
TTG
Gln
>WENV183488592
OMFZ01000062
59689
Actinomycetota
GGA
Ser
>WENV183488566
OMFZ01000035
175837
Actinomycetota
ACG
Arg
>WENV183488567
OMFZ01000035
175837
Actinomycetota
ACG
Arg
>WENV183488599
OMFZ01000069
29393
Actinomycetota
GCT
Ser
>WENV183488585
OMFZ01000053
280549
Actinomycetota
CAC
Val
>WENV183488657
OMFZ01000166
280549
Actinomycetota
CAC
Val
>WENV183488736
OMFZ01000474
349164
Actinomycetota
CTC
Glu
>WENV183488675
OMFZ01000203
280702
Actinomycetota
GGC
Ala
>WENV183488676
OMFZ01000203
280702
Actinomycetota
GGC
Ala
>WENV183488584
OMFZ01000053
434162
Actinomycetota
GAC
Val
>WENV183488656
OMFZ01000166
434162
Actinomycetota
GAC
Val
>WENV183488606
OMFZ01000083
176077
Actinomycetota
CAT
Met
>WENV183488737
OMFZ01000474
418858
Actinomycetota
CTG
Gln
>WENV183488700
OMFZ01000277
280524
Actinomycetota
TGC
Ala
>WENV183488624
OMFZ01000110
398948
Actinomycetota
TTC
Glu
>WENV183488553
OMFZ01000023
150272
Actinomycetota
TAA
Leu
>WENV183488597
OMFZ01000069
117777
Actinomycetota
>WENV183488598
OMFZ01000069
175949
Actinomycetota
CAT
Met
>WENV183488600
OMFZ01000070
191955
Actinomycetota
TGT
Thr
>WENV183488646
OMFZ01000150
280544
Actinomycetota
GTG
His
>WENV183488649
OMFZ01000155
280496
Actinomycetota
CGT
Thr
>WENV183488607
OMFZ01000083
280703
Actinomycetota
CCT
Arg
>WENV183488647
OMFZ01000155
323758
Actinomycetota
CGT
Thr
>WENV183488715
OMFZ01000332
99865
Actinomycetota
CAG
Leu
>WENV183488591
OMFZ01000062
222475
Actinomycetota
CTT
Lys
>WENV183488554
OMFZ01000023
175843
Actinomycetota
CAA
Leu
>WENV183488609
OMFZ01000084
56075
Actinomycetota
TGA
Ser
>WENV183488699
OMFZ01000277
179238
Actinomycetota
GAT
Ile
>WENV183488716
OMFZ01000332
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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