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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183496349
OMGM01000563
179231
Actinomycetota
TAC
Val
>WENV183496200
OMGM01000130
176499
Actinomycetota
CAT
Met
>WENV183496721
OMGM01015432
175883
Actinomycetota
GAT
Ile
>WENV183496000
OMGM01000002
280498
Actinomycetota
GTT
Asn
>WENV183496239
OMGM01000231
140768
Actinomycetota
TAG
Leu
>WENV183496231
OMGM01000197
175837
Actinomycetota
ACG
Arg
>WENV183496232
OMGM01000197
175837
Actinomycetota
ACG
Arg
>WENV183496014
OMGM01000006
187349
Actinomycetota
TGG
Pro
>WENV183496310
OMGM01000416
280441
Actinomycetota
CCG
Arg
>WENV183496005
OMGM01000002
176638
Actinomycetota
GGG
Pro
>WENV183496543
OMGM01003130
280524
Actinomycetota
TGC
Ala
>WENV183496793
OMGM01026858
291585
Actinomycetota
GCC
Gly
>WENV183495999
OMGM01000002
280523
Actinomycetota
GGC
Ala
>WENV183496544
OMGM01003130
280523
Actinomycetota
GGC
Ala
>WENV183496105
OMGM01000035
175841
Actinomycetota
TAT
Ile
>WENV183496865
OMGM01047002
280544
Actinomycetota
GTG
His
>WENV183496782
OMGM01025211
280536
Actinomycetota
CTT
Lys
>WENV183496224
OMGM01000185
175872
Actinomycetota
GTC
Asp
>WENV183496226
OMGM01000185
175872
Actinomycetota
GTC
Asp
>WENV183496447
OMGM01001495
20205
Actinomycetota
GCT
Ser
>WENV183496584
OMGM01004982
175926
Actinomycetota
CAT
Met
>WENV183496766
OMGM01020690
280450
Actinomycetota
TTT
Lys
>WENV183496295
OMGM01000345
480329
Actinomycetota
CCC
Gly
>WENV183496642
OMGM01009084
483206
Actinomycetota
CTG
Gln
>WENV183496015
OMGM01000006
20209
Actinomycetota
GAG
Leu
>WENV183495998
OMGM01000002
480319
Actinomycetota
TTG
Gln
>WENV183496343
OMGM01000553
280489
Actinomycetota
CTC
Glu
>WENV183496275
OMGM01000322
280499
Actinomycetota
CCT
Arg
>WENV183496344
OMGM01000553
398853
Actinomycetota
CTG
Gln
>WENV183496013
OMGM01000006
175843
Actinomycetota
CAA
Leu
>WENV183496481
OMGM01001865
203883
Actinomycetota
TCT
Arg
>WENV183496888
OMGM01053451
56075
Actinomycetota
TGA
Ser
>WENV183496183
OMGM01000110
46642
Actinomycetota
CGA
Ser
>WENV183496307
OMGM01000393
104211
Actinomycetota
CAG
Leu
>WENV183496199
OMGM01000130
117903
Actinomycetota
GTA
Tyr
>WENV183496181
OMGM01000110
56071
Actinomycetota
TGA
Ser
>WENV183496012
OMGM01000006
147796
Actinomycetota
TAA
Leu
>WENV183496238
OMGM01000231
280470
Actinomycetota
CGT
Thr
>WENV183496850
OMGM01041688
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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